| Gene: Gtf2h2 | ID: uc007rqt.1_intron_5_0_chr13_101247166_r.3p | SPECIES: mm9 |
|
|
(1) OTHER.ip |
(2) OTHER.mut |
(5) PIWI.ip |
(1) PIWI.mut |
(1) TDRD1.ip |
(18) TESTES |
| TTTCCAATAAAATTTTATCTATTTTATCTTTTGAGACAGGGTACTACAGTGTAGTCCTGGCTGGCCTTGAACTCACTATTAGACCAGGCTGGGCTTGAACTCACAGACATCCACCTGCCTCTGCCTCCTGACTGCTGGGTTTGAATAACATACTTGCTTTAGCTCTTTTCATCTTTTAAAAATAACTTTTCCACCCATAGGCATTTGGATAACAACAGCACTGAGCCAGGGCTTACACTGGGAGGCTACT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM475281(GSM475281) total RNA. (testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................TTAGACCAGGCTGGGCTTGAACTCACAGACATCCACCTGCCTCTGCCTCCTG........................................................................................................................ | 52 | 1 | 46.00 | 46.00 | 46.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TTTGGATAACAACAGCACTGAGCCAGG.................... | 27 | 1 | 11.00 | 11.00 | - | - | 2.00 | 4.00 | 1.00 | 1.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...........................................................................................................................................................................................................TTTGGATAACAACAGCACTGAGCCAGGGC.................. | 29 | 1 | 5.00 | 5.00 | - | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TTTGGATAACAACAGCACTGAGCCAGGt................... | 28 | t | 5.00 | 11.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .............................................................................................................................................................................................................TGGATAACAACAGCACTGAGCCAGGGC.................. | 27 | 1 | 5.00 | 5.00 | - | 3.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TGGATAACAACAGCACTGAGCCAGGGCT................. | 28 | 1 | 3.00 | 3.00 | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................CAGGGCTTACACTGGGA....... | 17 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TTGGATAACAACAGCACTGAGCCAGGGC.................. | 28 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TTGGATAACAACAGCACTGAGCCAGGGCTT................ | 30 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................CATTTGGATAACAACAGCACTGAGCCAGG.................... | 29 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................ATAACAACAGCACTGAGCCAGGGCTT................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................GACAGGGTACTACAGaggg..................................................................................................................................................................................................... | 19 | aggg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TTGGATAACAACAGCACTGAGCCAGGGCT................. | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TTTGGATAACAACAGCACTGAGCCAG..................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TTTGGATAACAACAGCACTGAGCCAGGGCTT................ | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TTTGGATAACAACAGCACTGAGCCAGGtt.................. | 29 | tt | 1.00 | 11.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TGAACTCACAGACATCCACCTGCCaa................................................................................................................................. | 26 | aa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...........................................................................................................................................................................................................TTTGGATAACAACAGCACTGAGCCAt..................... | 26 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................................................CTTGAACTCACAGACATCCACCcgc.................................................................................................................................... | 25 | cgc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................................................................................................................................................................ACACTGGGAGGCTACTttt | 19 | ttt | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| TTTCCAATAAAATTTTATCTATTTTATCTTTTGAGACAGGGTACTACAGTGTAGTCCTGGCTGGCCTTGAACTCACTATTAGACCAGGCTGGGCTTGAACTCACAGACATCCACCTGCCTCTGCCTCCTGACTGCTGGGTTTGAATAACATACTTGCTTTAGCTCTTTTCATCTTTTAAAAATAACTTTTCCACCCATAGGCATTTGGATAACAACAGCACTGAGCCAGGGCTTACACTGGGAGGCTACT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM475281(GSM475281) total RNA. (testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................ACTTGCTTTAGCTCTgaa.................................................................................... | 18 | gaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........................................................................................................CATCCACCTGCCTCTGaga............................................................................................................................... | 19 | aga | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................GAACTCACAGACATCCACCTgat...................................................................................................................................... | 23 | gat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |