| Gene: Lhfpl2 | ID: uc007rlp.1_intron_1_0_chr13_94890791_f.3p | SPECIES: mm9 |
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(6) OTHER.mut |
(5) PIWI.ip |
(1) PIWI.mut |
(25) TESTES |
| TGATAAGGTTCCCCACCGCCTGCCACTCAGTGCTGCCTCAAAAAATGAGGAACAATGGCATCCAGAAAACGCCCGGGGCCATCTGGCTAGGAGCTGAGCGCGGGAAGGTGGGCGGGAAGGTGGCGGGCGTCCCGGGTGGGGGTGGCGCGGGGCGGGGCGGGGCCTGGCCAGCCGCTCACCCTCCTCCTCTCTGGACATAGGTGAGGCTGCTGGCCGCTGGGACTCAGCACTCAGTCTGAATGCCGACAGC ..........................................................(((((.....(((((((..(((.(((.(((....(((...........))).))).))).)))..)))))))...)))))................................................................................................................ ..................................................51.........................................................................................142.......................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................GGCGGGCGTCCCGcgcg................................................................................................................ | 17 | cgcg | 378.00 | 0.00 | 158.00 | 93.00 | - | 82.00 | - | - | 33.00 | - | 12.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................TGAGGAACAATGGCATCCAGAAAACGCCC................................................................................................................................................................................ | 29 | 1 | 49.00 | 49.00 | - | - | 16.00 | - | 16.00 | 7.00 | 2.00 | 2.00 | - | 3.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................TGAGGAACAATGGCATCCAGAAAACGCC................................................................................................................................................................................. | 28 | 1 | 42.00 | 42.00 | 1.00 | - | 13.00 | 2.00 | 11.00 | 3.00 | - | 5.00 | 3.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................TCCTCTCTGGACATAGGTGAGGCTGC........................................ | 26 | 1 | 27.00 | 27.00 | - | - | 11.00 | - | 7.00 | 6.00 | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................TGAGGAACAATGGCATCCAGAAAACGC.................................................................................................................................................................................. | 27 | 1 | 26.00 | 26.00 | - | - | 10.00 | 1.00 | 10.00 | 1.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................TCTCTGGACATAGGTGAGGCTGCTGGCC................................... | 28 | 1 | 22.00 | 22.00 | - | - | 6.00 | - | 4.00 | 4.00 | - | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................TCTCTGGACATAGGTGAGGCTGCTGGCCGC................................. | 30 | 1 | 13.00 | 13.00 | - | - | 3.00 | - | 4.00 | 2.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................TGGCGGGCGTCCCGcgcg................................................................................................................ | 18 | cgcg | 9.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 2.00 | 2.00 | 3.00 | - | - | - | - | 1.00 | - | - | - | - | - |
| .............................................................................................................................................................................................TCTGGACATAGGTGAGGCTGCTGGCCGC................................. | 28 | 1 | 9.00 | 9.00 | - | - | 4.00 | - | 3.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................TCTGGCTAGGAGCTGAGCGCGGGAA................................................................................................................................................ | 25 | 1 | 7.00 | 7.00 | - | - | - | - | 1.00 | 4.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................TCTCTGGACATAGGTGAGGCTGCTGGC.................................... | 27 | 1 | 6.00 | 6.00 | - | - | 1.00 | - | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TGGCTAGGAGCTGAGCGCGGGAAGG.............................................................................................................................................. | 25 | 1 | 5.00 | 5.00 | - | - | - | - | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................GGCGGGCGTCCCGcgc................................................................................................................. | 16 | cgc | 5.00 | 0.00 | 2.00 | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TGGACATAGGTGAGGCTGCTGGCCGCT................................ | 27 | 1 | 4.00 | 4.00 | - | - | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................TGGGACTCAGCACTCAGTCTGAATGC....... | 26 | 1 | 4.00 | 4.00 | - | - | 3.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................TCTGGCTAGGAGCTGAGCGCGGGAAG............................................................................................................................................... | 26 | 1 | 4.00 | 4.00 | - | - | - | - | - | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TGGCTAGGAGCTGAGCGCGGGAAGGT............................................................................................................................................. | 26 | 1 | 4.00 | 4.00 | - | - | - | - | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................AAAAAATGAGGAACAATGGCATCCAG......................................................................................................................................................................................... | 26 | 1 | 4.00 | 4.00 | - | - | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................AAAAATGAGGAACAATGGCATCCAGA........................................................................................................................................................................................ | 26 | 1 | 4.00 | 4.00 | - | - | 3.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................GGCGGGCGTCCCGcccg................................................................................................................ | 17 | cccg | 3.00 | 0.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................TCTCTGGACATAGGTGAGGCTGCTGG..................................... | 26 | 1 | 3.00 | 3.00 | - | - | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................TGAGGAACAATGGCATCCAGAAAACG................................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................GGCGGGCGTCCCGctcg................................................................................................................ | 17 | ctcg | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................GGCGGGCGTCCCGcgcc................................................................................................................ | 17 | cgcc | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................TCTCTGGACATAGGTGAGGCTGCTGGCCGt................................. | 30 | t | 2.00 | 1.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................TCCTCTCTGGACATAGGTGAGGCTGCT....................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................AAAAATGAGGAACAATGGCATCCAGAAA...................................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................GGTGGGCGGGAAaaaa................................................................................................................................ | 16 | aaaa | 2.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................GGCGGGCGTCCCGcggg................................................................................................................ | 17 | cggg | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TGGCTAGGAGCTGAGCGCGGGAAGGTG............................................................................................................................................ | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................CAAAAAATGAGGAACAATGGCATCCAGA........................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................TCTCTGGACATAGGTGAGG............................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .........................................................................................................................GGCGGGCGTCCCGcg.................................................................................................................. | 15 | cg | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................CTCTGGACATAGGTGAGGCTGCTGGCCGC................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................TCTGGCTAGGAGCTGAGCGCGGGAAGtt............................................................................................................................................. | 28 | tt | 1.00 | 4.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................CTCTCTGGACATAGGTGAGGCTGCTG...................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................GGCTAGGAGCTGAGCGCGGGAAGGT............................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................GGACATAGGTGAGGCTGCTG...................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................TAGGAGCTGAGCGCGGGAAGGTGa........................................................................................................................................... | 24 | a | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................TCTGGCTAGGAGCTGAGCGCGGGAt................................................................................................................................................ | 25 | t | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................AATGAGGAACAATGGCATCCAGAAAA..................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................TGGCGGGCGTCCCGcgct................................................................................................................ | 18 | cgct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................CTGGGACTCAGCACTCAGTCTGAATGCC...... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TGGACATAGGTGAGGCTGCTGGCCGC................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................CTCTCTGGACATAGGTGAGGCTGC........................................ | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................TCTCTGGACATAGGTGAGGCTGCTGGCa................................... | 28 | a | 1.00 | 6.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TGGACATAGGTGAGGCTGCTGGCCaga................................ | 27 | aga | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................GGGACTCAGCACTCAGTCTGAATGCCGA.... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................................................................................TAGGAGCTGAGCGCGGGAAGGTGaga......................................................................................................................................... | 26 | aga | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................TCTGGACATAGGTGAGGCTGCTGGCCGa................................. | 28 | a | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................TCAGTGCTGCCTCAAAAAATGAGGAAC..................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................TGAGGAACAATGGCATCCAGAAAACGCCCGG.............................................................................................................................................................................. | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .....................................................................................................................................................................................TCCTCCTCTCTGGACATAGGTGAGGCTGC........................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................AAAAATGAGGAACAATGGCATCCAGAA....................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................TCTGGCTAGGAGCTGAGCGCGGGA................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .........TCCCCACCGCCTGCCACTCAGTGCTGC...................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................CTCCTCTCTGGACATAGGTGAGGCTGC........................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................TGCCTCAAAAAATGAGGAACAATGGCATC............................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................TAGGTGAGGCTGCTGGCCGCTGGGACTC......................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................TCTGGACATAGGTGAGGCTGCTGGCCt.................................. | 27 | t | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................CCGGGTGGGGGTGGCttt..................................................................................................... | 18 | ttt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .............................................TGAGGAACAATGGCATCCAGAAAACGCt................................................................................................................................................................................. | 28 | t | 1.00 | 26.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................CTCTGGACATAGGTGAGGCTGCTGGCC................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................ATGGCATCCAGAAAACGCCCGGGGCC.......................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................TCTGGACATAGGTGAGGCTGCTGGCC................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................TGGGACTCAGCACTCAGTCTGAATGCC...... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TGGCTAGGAGCTGAGCGCGGGAAGGTGa........................................................................................................................................... | 28 | a | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................CCTCCTCTCTGGACATAGGTGAGGCTG......................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................CCTCCTCTCTGGACATAGGTGAGGCTGg........................................ | 28 | g | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................TCTCTGGACATAGGTGAGGCTGCTGGCCG.................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................TCAAAAAATGAGGAACAATGGCATCCAG......................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................TCTGGCTAGGAGCTGAGCGCGGG.................................................................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TGGACATAGGTGAGGCTGC........................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TGATAAGGTTCCCCACCGCCTGCCACTCAGTGCTGCCTCAAAAAATGAGGAACAATGGCATCCAGAAAACGCCCGGGGCCATCTGGCTAGGAGCTGAGCGCGGGAAGGTGGGCGGGAAGGTGGCGGGCGTCCCGGGTGGGGGTGGCGCGGGGCGGGGCGGGGCCTGGCCAGCCGCTCACCCTCCTCCTCTCTGGACATAGGTGAGGCTGCTGGCCGCTGGGACTCAGCACTCAGTCTGAATGCCGACAGC ..........................................................(((((.....(((((((..(((.(((.(((....(((...........))).))).))).)))..)))))))...)))))................................................................................................................ ..................................................51.........................................................................................142.......................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................................................TGGCCGCTGGGACTCAGCACTCAGTCTGA........... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................GGGGCCATCTGGCTAGGAGCTGAGCGCGGGA................................................................................................................................................. | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ........................................................................................................................................................................................................GTGAGGCTGCTGGCCGCTGGGACTCAG....................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................CTCACCCTCCTCCTCTCTGGACATAt................................................... | 26 | t | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................CACTCAGTGCTGCCTCAAA................................................................................................................................................................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................GCCGCTCACCCTCCTCCTCTCTGGACA..................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |