| Gene: Homer1 | ID: uc007rlb.1_intron_1_0_chr13_94111868_f.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(1) PIWI.mut |
(6) TESTES |
| CACACACACACACACACACACACACACACACACACTCCTTTGGAATTTTTTAGATCATTAAAAATGTATCTATAATTCTTCTAGCCACTTATTTCTTCATGTCCACCACTCAAATTATCTTTATCTGTGTAGCTTTGTAAGTGATAAGTGATCCTATTTTTATACAGCTGAAATGGGCTTCTGTTTGTTTTATTTTTCAGGCAATAATAAATAGCACCATCACACCAAACATGACATTTACTAAAACATC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................TTTGTAAGTGATAAGTGATCCTATTTTTATACAGCTGAAATGGGCTTCTGTT................................................................. | 52 | 1 | 74.00 | 74.00 | 74.00 | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TCACACCAAACATGACATTTACTAAAACA.. | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - |
| ............................................................................................................................................................................................................TAATAAATAGCACCATCACACCAAACA................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - |
| ...............................................................................................................................................................................................................TAAATAGCACCATCACACCAAACATGACt.............. | 29 | t | 1.00 | 1.00 | - | - | 1.00 | - | - | - |
| ...............................................................................................................................................................................................................TAAATAGCACCATCACACCAAACATGAC............... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - |
| .....................................................................................................................................................................AGCTGAAATGGGCTagtt................................................................... | 18 | agtt | 1.00 | 0.00 | - | - | - | 1.00 | - | - |
| ........................................................................................................................................GTAAGTGATAAGTGAaaa................................................................................................ | 18 | aaa | 1.00 | 0.00 | - | - | 1.00 | - | - | - |
| CACACACACACACACACACACACACACACACACACTCCTTTGGAATTTTTTAGATCATTAAAAATGTATCTATAATTCTTCTAGCCACTTATTTCTTCATGTCCACCACTCAAATTATCTTTATCTGTGTAGCTTTGTAAGTGATAAGTGATCCTATTTTTATACAGCTGAAATGGGCTTCTGTTTGTTTTATTTTTCAGGCAATAATAAATAGCACCATCACACCAAACATGACATTTACTAAAACATC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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| ......................CACACACACTCCTTTGcgct................................................................................................................................................................................................................ | 20 | cgct | 1.00 | 0.00 | - | - | - | - | - | 1.00 |