(1)
OTHER.ip
(2)
OTHER.mut
(4)
PIWI.ip
(2)
PIWI.mut
(1)
TDRD1.ip
(23)
TESTES

Sense strand
GACAGTAGCCAGTAAGAAGAAGATAATGGGGCCAGGGACAAGTGATAGCCTTGCACTGCTACAGTTAGGAGCATCTGGCCAGGGCACAGGTGAGCTATGTCTTTATGCTGGTGGACTTCAGCCAGGCTGTGGCAGTTGGGGCACAACAGTAGGCTGTGCACCGGGAGAGACTCAGCAATTACTCTCCTTTCATCCTCCAGCTCCCTGGTAAGCACCAATGAGCATCTCCTGCAGGAGCTGAGCCGCACAC
............................................................((((((.((..((((((((....)).))))))..))..........(((((......)))))..))))))........................................................................................................................
..................................................51.............................................................................130......................................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
mjTestesWT1()
Testes Data. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT3()
Testes Data. (testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
..........................................................................................................................................................................................................................TGAGCATCTCCTGCAGGAGCTGAGCCGC.... 28 1 35.00 35.00 11.00 14.00 - 5.00 3.00 - - - - - - - 1.00 - - - - - - 1.00 - - -
............TAAGAAGAAGATAATGGGGCCAGGGA.................................................................................................................................................................................................................... 26 1 16.00 16.00 3.00 5.00 3.00 1.00 3.00 - - - - - - - 1.00 - - - - - - - - - -
...........................................................TACAGTTAGGAGCATCTGGCCAGGGC..................................................................................................................................................................... 26 1 15.00 15.00 1.00 4.00 3.00 1.00 1.00 - - - - - 1.00 - - 2.00 - 1.00 - - - - - - 1.00
........................................................TGCTACAGTTAGGAGCATCTGGCCAGG....................................................................................................................................................................... 27 1 11.00 11.00 4.00 2.00 3.00 - - - 2.00 - - - - - - - - - - - - - - - -
.................................................................................................................................................ACAGTAGGCTGTGCACCGGGAGAGAC............................................................................... 26 1 10.00 10.00 1.00 1.00 2.00 - - - - - 1.00 - - 4.00 - - - - - - - - - 1.00 -
...................................................TGCACTGCTACAGTTAGGAGCATCTGGCC.......................................................................................................................................................................... 29 1 9.00 9.00 2.00 4.00 - 2.00 - - 1.00 - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................TGAGCATCTCCTGCAGGAGCTGAGCCG..... 27 1 8.00 8.00 3.00 2.00 - - 3.00 - - - - - - - - - - - - - - - - - -
.........................................................................................................TGCTGGTGGACTTCAGCCAGGCTGTGGCAt................................................................................................................... 30 t 7.00 3.00 2.00 - 1.00 3.00 1.00 - - - - - - - - - - - - - - - - - -
............TAAGAAGAAGATAATGGGGCCAGGGAC................................................................................................................................................................................................................... 27 1 7.00 7.00 2.00 1.00 4.00 - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................CAGTAGGCTGTGCACCGGGAGAGACTC............................................................................. 27 1 7.00 7.00 3.00 1.00 3.00 - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................CAGTAGGCTGTGCACCGGGAGAGACT.............................................................................. 26 1 6.00 6.00 - 2.00 1.00 - - - - 2.00 - - - - 1.00 - - - - - - - - - -
.................................................................TAGGAGCATCTGGCCAGGGCACAGGT............................................................................................................................................................... 26 1 5.00 5.00 - - - 3.00 - - - - - - 1.00 - - - - - - - 1.00 - - - -
.................................................................................................................................................ACAGTAGGCTGTGCACCGGGAGA.................................................................................. 23 1 5.00 5.00 - - - - - 5.00 - - - - - - - - - - - - - - - - -
.................................................................................................................................TGGCAGTTGGGGCACAACAGTAGGCTG.............................................................................................. 27 1 5.00 5.00 1.00 - 2.00 - 2.00 - - - - - - - - - - - - - - - - - -
..................................................................................................................................................CAGTAGGCTGTGCACCGGGAGAG................................................................................. 23 1 4.00 4.00 - - - - - 4.00 - - - - - - - - - - - - - - - - -
........................................................TGCTACAGTTAGGAGCATCTGGCCAG........................................................................................................................................................................ 26 1 4.00 4.00 - 3.00 - 1.00 - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................TAGGCTGTGCACCGGGAGAGACTCAGC.......................................................................... 27 1 4.00 4.00 1.00 - - - 2.00 - - - - - - - - - - - 1.00 - - - - - -
..................................................................................................................................................CAGTAGGCTGTGCACCGGGAGAGAC............................................................................... 25 1 4.00 4.00 - - 2.00 2.00 - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................ACAACAGTAGGCTGTGCACCGGGAGA.................................................................................. 26 1 3.00 3.00 3.00 - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................TAAGCACCAATGAGCATCTCCTGCAGGAGC............ 30 1 3.00 3.00 1.00 - - - - - - 1.00 - - 1.00 - - - - - - - - - - - -
.........................................................................................................TGCTGGTGGACTTCAGCCAGGCTGTGGCA.................................................................................................................... 29 1 3.00 3.00 1.00 - 1.00 - - - 1.00 - - - - - - - - - - - - - - - -
...........................................................TACAGTTAGGAGCATCTGGCCAGGG...................................................................................................................................................................... 25 1 2.00 2.00 - - 1.00 - - - - - - - - - - - 1.00 - - - - - - - -
..................................................................................................................................................................................................................................TCCTGCAGGAGCTGAGCCGCACACggt 27 ggt 2.00 0.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - -
.............AAGAAGAAGATAATGGGGCCAGGGAC................................................................................................................................................................................................................... 26 1 2.00 2.00 - - 2.00 - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................TGAGCATCTCCTGCAGGAGCTGAGC....... 25 1 2.00 2.00 - - - 1.00 - - 1.00 - - - - - - - - - - - - - - - -
..........................................................................................TGAGCTATGTCTTTATGCTGGTGGACT..................................................................................................................................... 27 1 2.00 2.00 - - - - - - 1.00 1.00 - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................TCTCCTGCAGGAGCTGAGCCGCACAC 26 1 2.00 2.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................ACAACAGTAGGCTGTGCACCGGGAG................................................................................... 25 1 2.00 2.00 - - - 2.00 - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................TGTGCACCGGGAGAGACTCAGCAATT...................................................................... 26 1 2.00 2.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - -
..............AGAAGAAGATAATGGGGCCAGGGACA.................................................................................................................................................................................................................. 26 1 2.00 2.00 - - 2.00 - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................CAGTAGGCTGTGCACCGGGAGAGACTCA............................................................................ 28 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - -
...........................................................TACAGTTAGGAGCATCTGGCCAGGGCAC................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................TCCCTGGTAAGCACCAATGAGCATCTCC..................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................TCAGCAATTACTCTCCTTTCATCCTCCAGCT................................................ 31 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - -
.................................................................................................................................TGGCAGTTGGGGCACAACAGTAGGCTGT............................................................................................. 28 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - -
.............................................................CAGTTAGGAGCATCTGGCCAGGGCAC................................................................................................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................TGGCAGTTGGGGCACAACAGTAGGCTGTG............................................................................................ 29 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
..........................................................................................TGAGCTATGTCTTTATGCTGGTGGAC...................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - -
..........................................................................................................................................................TGTGCACCGGGAGAGACTCAGCAATTA..................................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
..........................................TGATAGCCTTGCACTGCTACAGTTAGt..................................................................................................................................................................................... 27 t 1.00 0.00 - - - - - - - - - 1.00 - - - - - - - - - - - - -
.........................................................................................................TGCTGGTGGACTTCAGCCAGGCTGTGG...................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - -
.............................................TAGCCTTGCACTGCTACAGTTAGGAGCATC............................................................................................................................................................................... 30 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - -
.....................................................................................................................................................TAGGCTGTGCACCGGGAGAGACTCAGt.......................................................................... 27 t 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - -
.................AGAAGATAATGGGGCCAGGGACAAGT............................................................................................................................................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
...........................................................TACAGTTAGGAGCATCTGGCCAGGGCACA.................................................................................................................................................................. 29 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................AGGCTGTGCACCGGGAGAGACTCAGC.......................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................CAGTAGGCTGTGCACCGGGAGAGACTt............................................................................. 27 t 1.00 6.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................TGGCAGTTGGGGCACAACAGTAGGCTGg............................................................................................. 28 g 1.00 5.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................AACAGTAGGCTGTGCACCGGGAGAG................................................................................. 25 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - -
............................................................ACAGTTAGGAGCATCTGGCCAGGGC..................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - -
.............................................................................................................................................................................................................TGGTAAGCACCAATGAGCATCTCCTGC.................. 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - -
.......................TAATGGGGCCAGGGACAAGTGATAGC......................................................................................................................................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................GTAGGCTGTGCACCGGGAGAGACTCt............................................................................ 26 t 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................GTAGGCTGTGCACCGGGAGAGACTCA............................................................................ 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................TGCACCGGGAGAGACTCAGCAATTACT................................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
........................................................TGCTACAGTTAGGAGCATCTGGCCAGGG...................................................................................................................................................................... 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................TGGCAGTTGGGGCACAACAGTAGGCTa.............................................................................................. 27 a 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................TGAGCATCTCCTGCAGGAGCTGAGCCGCAC.. 30 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - -
.............AAGAAGAAGATAATGGGGCCAGGGA.................................................................................................................................................................................................................... 25 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
.............AAGAAGAAGATAATGacac.......................................................................................................................................................................................................................... 19 acac 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................TGAGCATCTCCTGCAGGAGCTGAGCC...... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
.....................GATAATGGGGCCAGGGA.................................................................................................................................................................................................................... 17 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - -
..................................................................AGGAGCATCTGGCCAGGGCACAGa................................................................................................................................................................ 24 a 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - -
............TAAGAAGAAGATAATGGGGCCAGtga.................................................................................................................................................................................................................... 26 tga 1.00 0.00 - - - - - - - - - 1.00 - - - - - - - - - - - - -
.................................................................................................................................TGGCAGTTGGGGCACAACAGTAGGCT............................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
............TAAGAAGAAGATAATGGGGCCAGGGt.................................................................................................................................................................................................................... 26 t 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................TAAGCACCAATGAGCATCTCCTGCAG................ 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - -
...........................................................................TGGCCAGGGCACAGGTGAGCTATGTCTTTA................................................................................................................................................. 30 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - -
.................................................................................................................................................ACAGTAGGCTGTGCACCGGGAGAGACT.............................................................................. 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - -
...................................................................................................................................................AGTAGGCTGTGCACCGGGAGAGAag.............................................................................. 25 ag 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................TAAGCACCAATGAGCATCTCCTGCAGG............... 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................TAGGCTGTGCACCGGGAGAGACTCAGCA......................................................................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................ACAGTAGGCTGTGCACCGGGAGAGACTC............................................................................. 28 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - -
.................................................................................................................................................ACAGTAGGCTGTGCACCGGGAGAG................................................................................. 24 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - -
................................................................................................................................................AACAGTAGGCTGTGCACCGGGAGAGA................................................................................ 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................TGTGCACCGGGAGAGACTCAGCAATTACT................................................................... 29 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
............................................................ACAGTTAGGAGCATCTGGCCAGGGCACAG................................................................................................................................................................. 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
........................................................TGCTACAGTTAGGAGCATCTGGCCA......................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - -
..................................................................................................................................................CAGTAGGCTGTGCACCGGGAGAGACTCAt........................................................................... 29 t 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................CAACAGTAGGCTGTGCACCGGGAGA.................................................................................. 25 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - -
...................................................................................................................................................AGTAGGCTGTGCACCGGGAGAGACTCA............................................................................ 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - -
.....TAGCCAGTAAGAAGAAGATAATGGGGCC......................................................................................................................................................................................................................... 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................TGTGCACCGGGAGAGACTCAGCAATTAC.................................................................... 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................TAGGCTGTGCACCGGGAGAGACTCAG........................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
.................................................................TAGGAGCATCTGGCCAGGGCACAGGTGt............................................................................................................................................................. 28 t 1.00 0.00 - - - - - - - - - - - - - 1.00 - - - - - - - - -
.........................................................................................................................................................................................................TCCCTGGTAAGCACCAATGAGCATCTCCT.................... 29 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
........................................................TGCTACAGTTAGGAGCATCTGGCCAGGGC..................................................................................................................................................................... 29 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - -
...................................................................................................................................................AGTAGGCTGTGCACCGGGAGAGACTC............................................................................. 26 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - -
..........................................................CTACAGTTAGGAGCATCTGGCC.......................................................................................................................................................................... 22 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - -
.........CAGTAAGAAGAAGATAATGGGGCCAG....................................................................................................................................................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................TGGTGGACTTCAGCCAGGCTGTGGCA.................................................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................TAGGCTGTGCACCGGGAGAGACTCA............................................................................ 25 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - -

Antisense strand
GACAGTAGCCAGTAAGAAGAAGATAATGGGGCCAGGGACAAGTGATAGCCTTGCACTGCTACAGTTAGGAGCATCTGGCCAGGGCACAGGTGAGCTATGTCTTTATGCTGGTGGACTTCAGCCAGGCTGTGGCAGTTGGGGCACAACAGTAGGCTGTGCACCGGGAGAGACTCAGCAATTACTCTCCTTTCATCCTCCAGCTCCCTGGTAAGCACCAATGAGCATCTCCTGCAGGAGCTGAGCCGCACAC
............................................................((((((.((..((((((((....)).))))))..))..........(((((......)))))..))))))........................................................................................................................
..................................................51.............................................................................130......................................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
mjTestesWT1()
Testes Data. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT3()
Testes Data. (testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
...........................................................................................................................................................................................CATCCTCCAGCTCCCTgga............................................ 19 gga 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - -