| Gene: Zcchc6 | ID: uc007qvf.1_intron_7_0_chr13_59890887_r | SPECIES: mm9 |
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(2) OTHER.mut |
(1) OVARY |
(1) PIWI.ip |
(8) TESTES |
| TTGACCCCAGAGTGAAGTATCTGTGCTACACCATGAAAGTGTTCACAAAGGTAGGTACATTGATGCATGTGGTTTATCTGGAAATTGCTGTATGGACCAGGCTGGCTTCAAACTCACAGAGACCATCCTGCCTCCTAAGTGTATGCGCCACAATGCCTGACCTTAGTGTGTTAACTTTTCATGATGCTCCTGCTATGACCGACAATCCACTTCTTTGTTGAATTCAGTTTAATTCAGGTTGGGGTGGTTGCTTTTGTTGACATATTTTTATTTTTTAAGATATGGTTTTCATATTAGTTCCTCAAGAAGTGGTGGTAATGGGGTGACTGCAAGCTGAGTAGAAACACCCTTCAGAGTGCTCTCTCCCTCTAGATGTGTGACATCGGTGACGCGTCCAGAGGCAGCTTGTCATCCTACGCTTA ...................................................................................................................................................................................................................................................................................................(((((.(((.....))).))))).....((((.((..(((..(((((...........)))))..)))..)).))))...................................................... ................................................................................................................................................................................................................................................................................273................................................................................................372................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014234(GSM319958) Ovary total. (ovary) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................................................................................................................................................................................................................AATGGGGTGACTGCAAGCTGAGT................................................................................... | 23 | 1 | 3.00 | 3.00 | - | 1.00 | 1.00 | - | 1.00 | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................TAATGGGGTGACTGCAAGCTGA..................................................................................... | 22 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................TAATGGGGTGACTGCAAGCTG...................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................GTGGTAATGGGGTGggca............................................................................................. | 18 | ggca | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................CCTGCCTCCTAAGTGTATGCGCCACAATGCCTGA...................................................................................................................................................................................................................................................................... | 34 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................AATGGGGTGACTGCAAGCTGAG.................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| TTGACCCCAGAGTGAAGTATCTGTGCTACACCATGAAAGTGTTCACAAAGGTAGGTACATTGATGCATGTGGTTTATCTGGAAATTGCTGTATGGACCAGGCTGGCTTCAAACTCACAGAGACCATCCTGCCTCCTAAGTGTATGCGCCACAATGCCTGACCTTAGTGTGTTAACTTTTCATGATGCTCCTGCTATGACCGACAATCCACTTCTTTGTTGAATTCAGTTTAATTCAGGTTGGGGTGGTTGCTTTTGTTGACATATTTTTATTTTTTAAGATATGGTTTTCATATTAGTTCCTCAAGAAGTGGTGGTAATGGGGTGACTGCAAGCTGAGTAGAAACACCCTTCAGAGTGCTCTCTCCCTCTAGATGTGTGACATCGGTGACGCGTCCAGAGGCAGCTTGTCATCCTACGCTTA ...................................................................................................................................................................................................................................................................................................(((((.(((.....))).))))).....((((.((..(((..(((((...........)))))..)))..)).))))...................................................... ................................................................................................................................................................................................................................................................................273................................................................................................372................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014234(GSM319958) Ovary total. (ovary) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................CAGGCTGGCTTCAAACTCACAcca................................................................................................................................................................................................................................................................................................................ | 24 | cca | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - |
| ................................................................................................................................................................................................................................................................................................ATTAGTTCCTCAAGAAgagg.................................................................................................................. | 20 | gagg | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - |
| ................................................................................................GGCTGGCTTCAAACTCACAGAGAcga............................................................................................................................................................................................................................................................................................................ | 26 | cga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 |
| ...........................................................................................ACCAGGCTGGCTTCAAACTCACttaa................................................................................................................................................................................................................................................................................................................. | 26 | ttaa | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - |