| Gene: Isca1 | ID: uc007qvd.1_intron_2_0_chr13_59864157_r.3p | SPECIES: mm9 |
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(1) OTHER.mut |
(1) PIWI.mut |
(6) TESTES |
| TGCAGTAAATGCACAAAATATAACCTCAGGGGCGTGGGGTTCTGTCTGGGTAGATAGCACAGGAGGAGTGTGCTTTTGCTGTGGCTTCCTTTGCTGGACTAAATCCACAGGTCCTCTGGAAAGACATGGCTTATTACCGACTGCTGTAGTGGAAGGCTTTTCCAGAAGATGAGTTTGATAAATTGTTTCTTTTTTTTCAGACCCCCTCTGCTGTAAACAAGATAAAACAACTTCTTAAAGACAAACCTGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................................CTGCTGTAGTGGAAGGCTTTTCCAGAAGATGAGTTTGATAAATTGTTTCTTT.......................................................... | 52 | 1 | 133.00 | 133.00 | 133.00 | - | - | - | - | - |
| ................................................................................................................................................................................................................TGCTGTAAACAAGATAAAACAACTTCTT.............. | 28 | 2 | 1.50 | 1.50 | - | 1.00 | 0.50 | - | - | - |
| ................................................................................................................................................................................................................TGCTGTAAACAAGATAAAACAACTTCTTA............. | 29 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - |
| ..............................................................................................................................................................................................................................TAAAACAACTTCTTAAAGACAAACCTG. | 27 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - |
| ...............................................................................................................................................................................................................CTGCTGTAAACAAGATAAAACAACTT................. | 26 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - |
| ..............................................................................................................................................................................................................TCTGCTGTAAACAAGATAAAACAACTTC................ | 28 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - |
| TGCAGTAAATGCACAAAATATAACCTCAGGGGCGTGGGGTTCTGTCTGGGTAGATAGCACAGGAGGAGTGTGCTTTTGCTGTGGCTTCCTTTGCTGGACTAAATCCACAGGTCCTCTGGAAAGACATGGCTTATTACCGACTGCTGTAGTGGAAGGCTTTTCCAGAAGATGAGTTTGATAAATTGTTTCTTTTTTTTCAGACCCCCTCTGCTGTAAACAAGATAAAACAACTTCTTAAAGACAAACCTGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................................................................TTTTTTTTCAGACCCCCTaaaa........................................... | 22 | aaaa | 1.00 | 0.00 | - | 1.00 | - | - | - | - |
| ...........................................................................................................................................................................................................................AGATAAAACAACTTCTTAAAGACAAACC... | 28 | 2 | 0.50 | 0.50 | - | - | - | - | - | 0.50 |