| Gene: Spock1 | ID: uc007qtd.1_intron_0_0_chr13_57530847_r.3p | SPECIES: mm9 |
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(5) OTHER.mut |
(2) PIWI.ip |
(3) PIWI.mut |
(17) TESTES |
| TGACAGAAAATTAACCCCGACAGGTTTCTGTCAGAGCAGCTCAGGGCCGAGCCCGTGAGATTGCTTCAAGCTGAGTTCCCACAGGGCAGAAGCAAAAGTCCTGGGTTTGCCCTAGAACTCAAGTTAAAAGCGCAGGGAGCCCCAGCATGGGTCAAGGGGGACAGAAGGAACTAACCCTAGGTCTTTCCTTCCTATGCCAGAAGAGGAGCAGGAAACCTCCGGGGACTTCGGCAGTGGAGGCTCCGTGGTC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................TAGAACTCAAGTTAAAAGCGCAGGGA................................................................................................................ | 26 | 1 | 38.00 | 38.00 | 30.00 | 1.00 | 1.00 | - | 1.00 | - | - | 1.00 | 2.00 | - | - | - | 1.00 | 1.00 | - | - | - |
| ................................................................................................................TAGAACTCAAGTTAAAAGCGCAGGGAGC.............................................................................................................. | 28 | 1 | 12.00 | 12.00 | 8.00 | 1.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - |
| ................................................................................................................TAGAACTCAAGTTAAAAGCGCAGGGAG............................................................................................................... | 27 | 1 | 8.00 | 8.00 | - | 1.00 | 2.00 | - | 2.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................TAGAACTCAAGTTAAAAGCGCAGGG................................................................................................................. | 25 | 1 | 3.00 | 3.00 | - | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TGCCAGAAGAGGAGCAGGAAACCTCCGt............................ | 28 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TGCCAGAAGAGGAGCAGGAAACCTCC.............................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................TTCTGTCAGAGCAGCTCAGGGCCGA........................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................TTCCTATGCCAGAAGAGGAGCAGGAAAC.................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................TAGAACTCAAGTTAAAAGCGCAGG.................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................................................TGAGATTGCTTCAAGCTGAGTTCCCACA....................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ................................................................................................................TAGAACTCAAGTTAAAAGCGCAGGGAGa.............................................................................................................. | 28 | a | 1.00 | 8.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................TTCTGTCAGAGCAGCTCAGGGCCGAGCC..................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................TCTGTCAGAGCAGCTCAGGGCCGAGCC..................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................AGAACTCAAGTTAAAAGCGCAGGGAGCC............................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| TGACAGAAAATTAACCCCGACAGGTTTCTGTCAGAGCAGCTCAGGGCCGAGCCCGTGAGATTGCTTCAAGCTGAGTTCCCACAGGGCAGAAGCAAAAGTCCTGGGTTTGCCCTAGAACTCAAGTTAAAAGCGCAGGGAGCCCCAGCATGGGTCAAGGGGGACAGAAGGAACTAACCCTAGGTCTTTCCTTCCTATGCCAGAAGAGGAGCAGGAAACCTCCGGGGACTTCGGCAGTGGAGGCTCCGTGGTC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................GGGTTTGCCCTAGAACTCAAGTTAAAA......................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............CCCGACAGGTTTCTGTCAGAGCAGCTCA............................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |