| Gene: Tmed9 | ID: uc007qrr.1_intron_3_0_chr13_55696976_f.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(2) PIWI.ip |
(10) TESTES |
| TCTGACAAATGGACAGACAGACTTAGGAGAAATGCCTTAGTCTGCCAGCAGTCATTCGACTGCTACTGATGAAGATAGTCCCCACAGGCATCTGGCCACACTTTGGGCAGAGTGGGTGGCCCTGGGGATCTTTGCAAGCTGGGAACACAGCGGTTCCAGCAGTCTTAGACTACTAAGCCTTGCCGCTTATTTCCCAACAGTGGCGAGAAGAGCGCTTCAGACAAACCAGCGAAAGCACCAACCAGCGAGT ...........................................................................................................................................((((((...((((((......((.(((((....))))).)).))))))...))))))...................................................... ...................................................................................................................................132.................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................GGGTGGCCCTGGGGATCTTTGCAAGC............................................................................................................... | 26 | 1 | 6.00 | 6.00 | 6.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................CTTCAGACAAACCAGCGAAA................ | 20 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - |
| ..TGACAAATGGACAGACAGACTTAGGA.............................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | 1.00 | - | - |
| ..................................................................................................................................................................................CTTGCCGCTTATTTCCCAACA................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 |
| ........................................................................................................................................AGCTGGGAACACAGCGGTTCCAG........................................................................................... | 23 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................CGAGAAGAGCGCTTCAGACAAACCAGC.................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................................................................................................................................................CTTGCCGCTTATTTCCCAACAGT................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................................................................CTGGGAACACAGCGGTTCCAG........................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - |
| TCTGACAAATGGACAGACAGACTTAGGAGAAATGCCTTAGTCTGCCAGCAGTCATTCGACTGCTACTGATGAAGATAGTCCCCACAGGCATCTGGCCACACTTTGGGCAGAGTGGGTGGCCCTGGGGATCTTTGCAAGCTGGGAACACAGCGGTTCCAGCAGTCTTAGACTACTAAGCCTTGCCGCTTATTTCCCAACAGTGGCGAGAAGAGCGCTTCAGACAAACCAGCGAAAGCACCAACCAGCGAGT ...........................................................................................................................................((((((...((((((......((.(((((....))))).)).))))))...))))))...................................................... ...................................................................................................................................132.................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................................................CTTCAGACAAACCAGCGAAAGCACCA.......... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - |