(7)
OTHER.mut
(1)
OVARY
(5)
PIWI.ip
(25)
TESTES

Sense strand
CGAGCCGAGGGAGTGAGCCGGGCGGAGCCAGCGCCCCCCGCCCCCCGCCGGCCGGCTCCCCTCCCCCGGCCGCTGGCTCGCTCGCTCTCAGCGCTGCAGAGGCTCTGAGGCGGCGGCGGCGACTCCCTCATCCCCTCCCTCCGGTGTCGGTCGGTCCGCCTGTGCGTGCGTCTGTCCGTTCGGCCTCGGTCCGGCCCGCAGCATGGCCGGCGTCAGCTTCAGCGGCCACCGCCTGGAGCTGCTG


Size Perfect hit Total Norm Perfect Norm mjTestesWT1()
Testes Data. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
mjTestesWT2()
Testes Data. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
mjTestesWT4()
Testes Data. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
mjTestesWT3()
Testes Data. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR037902(GSM510438)
testes_rep3. (testes)
..............................................................................................................CGGCGGCGGCGACTCtgga................................................................................................................... 19 tgga 1948.00 0.00 705.00 129.00 183.00 222.00 399.00 206.00 16.00 63.00 5.00 5.00 1.00 3.00 - 7.00 1.00 1.00 1.00 1.00 - - - - - - - -
..............................................................................................................CGGCGGCGGCGACTCtgg.................................................................................................................... 18 tgg 1532.00 0.00 394.00 648.00 193.00 235.00 12.00 4.00 15.00 14.00 3.00 5.00 3.00 2.00 1.00 1.00 2.00 - - - - - - - - - - -
.............................................................................................................GCGGCGGCGGCGACTCtgga................................................................................................................... 20 tgga 1348.00 0.00 588.00 122.00 106.00 136.00 193.00 160.00 4.00 29.00 1.00 - - - 3.00 2.00 - 2.00 1.00 1.00 - - - - - - - -
.............................................................................................................GCGGCGGCGGCGACTCtgg.................................................................................................................... 19 tgg 1018.00 0.00 424.00 417.00 111.00 41.00 16.00 1.00 1.00 3.00 2.00 1.00 - - - 1.00 - - - - - - - - - - - -
..............................................................................................................CGGCGGCGGCGACTCtg..................................................................................................................... 17 tg 423.00 0.00 147.00 67.00 158.00 15.00 - 4.00 14.00 - 3.00 2.00 8.00 4.00 - - 1.00 - - - - - - - - - - -
.............................................................................................................GCGGCGGCGGCGACTCtg..................................................................................................................... 18 tg 336.00 0.00 104.00 80.00 145.00 1.00 - - 2.00 1.00 - 2.00 - 1.00 - - - - - - - - - - - - - -
................................................................................................................GCGGCGGCGACTCtgg.................................................................................................................... 16 tgg 45.00 0.00 - - - - - - 24.00 - 10.00 7.00 3.00 1.00 - - - - - - - - - - - - - -
................................................................................................................GCGGCGGCGACTCtg..................................................................................................................... 15 tg 40.00 0.00 - - - - - - 29.00 - 4.00 2.00 2.00 3.00 - - - - - - - - - - - - - -
............................................................................................................GGCGGCGGCGGCGACTCtgga................................................................................................................... 21 tgga 35.50 0.17 6.83 5.83 3.00 5.17 8.33 5.17 - 0.67 - - - - 0.17 0.17 - - 0.17 - - - - - - - - -
................................................................................................................GCGGCGGCGACTCtgga................................................................................................................... 17 tgga 31.00 0.00 - - - - - - 15.00 - 7.00 6.00 2.00 1.00 - - - - - - - - - - - - - -
...............................................................................................................GGCGGCGGCGACTCtgga................................................................................................................... 18 tgga 23.00 0.00 - - - - - - 8.00 - 3.00 - - - 8.00 - - 3.00 1.00 - - - - - - - - -
............................................................................................................GGCGGCGGCGGCGACTCtgg.................................................................................................................... 20 tgg 22.67 0.17 7.00 11.50 3.83 0.17 - - - - - - - - - - 0.17 - - - - - - - - - - -
...............................................................................................................GGCGGCGGCGACTCtgg.................................................................................................................... 17 tgg 9.00 0.00 - - - - - - 7.00 - - 2.00 - - - - - - - - - - - - - - - -
...............................................................................................GCAGAGGCTCTGAGGCGG................................................................................................................................... 18 1 9.00 9.00 5.00 - - - 4.00 - - - - - - - - - - - - - - - - - - - - -
............................................................................................................GGCGGCGGCGGCGACTCtg..................................................................................................................... 19 tg 8.00 0.17 1.33 2.00 4.67 - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................GGCGGCGGCGACTCtg..................................................................................................................... 16 tg 6.00 0.00 - - - - - - 3.00 - 1.00 1.00 - 1.00 - - - - - - - - - - - - - -
...............................................................................................GCAGAGGCTCTGAGGCGGCGGCGGCGACTCC...................................................................................................................... 31 1 4.00 4.00 - - - - 4.00 - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................TCTGAGGCGGCGGCGGCGACT........................................................................................................................ 21 1 4.00 4.00 - 1.00 - - 3.00 - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................CGGCGGCGGCGACTCt...................................................................................................................... 16 t 4.00 0.00 - - 1.00 2.00 - - 1.00 - - - - - - - - - - - - - - - - - - -
..............................................................................................................CGGCGGCGGCGACTCtggg................................................................................................................... 19 tggg 3.00 0.00 - - - 3.00 - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................AGGCGGCGGCGGCGACTCtg..................................................................................................................... 20 tg 2.00 0.00 - 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................CGGCGGCGGCGACTCtaga................................................................................................................... 19 taga 2.00 0.00 - - - - 1.00 - - - - - - 1.00 - - - - - - - - - - - - - -
.........................................................................................AGCGCTGCAGAGGCTCTGAGGCGGCGGCGGCG........................................................................................................................... 32 1 2.00 2.00 - - - - - - - 2.00 - - - - - - - - - - - - - - - - - -
...........................................................................................................AGGCGGCGGCGGCGACTCtgg.................................................................................................................... 21 tgg 2.00 0.00 - 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................GCGGCGGCGGCGACTCt...................................................................................................................... 17 t 2.00 0.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................GCGGCGGCGGCGACTatgg.................................................................................................................... 19 atgg 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................TGCAGAGGCTCTGAGGCG.................................................................................................................................... 18 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
..........................................................................................................GAGGCGGCGGCGGCGACTCCC..................................................................................................................... 21 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
.............................................................................................................GCGGCGGCGGCGACTCtgaa................................................................................................................... 20 tgaa 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.....................................CCGCCCCCCGCCGGCgacc............................................................................................................................................................................................ 19 gacc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
...............................................................................................................GGCGGCGGCGACTCt...................................................................................................................... 15 t 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
..............................................................................................TGCAGAGGCTCTGAGGCGGCGGCGG............................................................................................................................. 25 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.............................................................................................................GCGGCGGCGGCGACTCttga................................................................................................................... 20 ttga 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................CGGCGGCGGCGACTCtag.................................................................................................................... 18 tag 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................GCGGCGGCGACTCtggg................................................................................................................... 17 tggg 1.00 0.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
....................................................................................................GGCTCTGAGGCGGCGGCGGCG........................................................................................................................... 21 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
..............................................................................................................CGGCGGCGGCGACTCttg.................................................................................................................... 18 ttg 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
..............................................................................................................CGGCGGCGGCGACTCtccc................................................................................................................... 19 tccc 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................GAGGCTCTGAGGCGGCGGCGGCGAC......................................................................................................................... 25 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
................................................................................................................GCGGCGGCGACTCtggt................................................................................................................... 17 tggt 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.............................................................................................................GCGGCGGCGGCGACTCaa..................................................................................................................... 18 aa 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
..............................................................................................................CGGCGGCGGCGACTCagg.................................................................................................................... 18 agg 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
............................................................................................................................................CCGGTGTCGGTCGGTCCGCCTG.................................................................................. 22 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
.........................................................................................AGCGCTGCAGAGGCTCTGAGGCGGC.................................................................................................................................. 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
......................................................................................................................................................................................................................AGCTTCAGCGGCCACgag............ 18 gag 1.00 0.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
...............................................................................................GCAGAGGCTCTGAGGCGGCGGCGG............................................................................................................................. 24 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...........................................................................................................AGGCGGCGGCGGCGACTCtgga................................................................................................................... 22 tgga 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................CGGCGGCGGCGACTCta..................................................................................................................... 17 ta 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
.............................................................................................................GCGGCGGCGGCGACTCtggc................................................................................................................... 20 tggc 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................CGGCGGCGGCGACTCtgt.................................................................................................................... 18 tgt 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................CGGCGGCGGCGACTCCggac.................................................................................................................. 20 ggac 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..............................................................................................................CGGCGGCGGCGACTCtga.................................................................................................................... 18 tga 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................GCGGCGGCGGCGACTCtgt.................................................................................................................... 19 tgt 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................GCTGCAGAGGCTCTGAGGCGGC.................................................................................................................................. 22 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
.........................................................................................AGCGCTGCAGAGGCTCTGAGGCGGCGG................................................................................................................................ 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
..............................................................................................................CGGCGGCGGCGACTCCCT.................................................................................................................... 18 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
...................................................................................................................................................CGGTCGGTCCGCCTGTGCGTGCG.......................................................................... 23 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
..............................................................................................................CGGCGGCGGCGACTCtgc.................................................................................................................... 18 tgc 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................GCAGAGGCTCTGAGGCGGC.................................................................................................................................. 19 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................CTGCAGAGGCTCTGAGGCGG................................................................................................................................... 20 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.........................................................................................AGCGCTGCAGAGGCTCTGAGGCGGCG................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
..........................................................................................GCGCTGCAGAGGCTCTGAGGCGG................................................................................................................................... 23 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................GGCGGCGGCGGCGACT........................................................................................................................ 16 18 0.56 0.56 0.22 0.11 - 0.22 - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................GCGGCGGCGGCGACTCCC..................................................................................................................... 18 4 0.25 0.25 - - - - - - - - - - - - - - - - - - - 0.25 - - - - - -
............................................................................................................GGCGGCGGCGGCGACTC....................................................................................................................... 17 6 0.17 0.17 - - - - - - - - - - - - - - 0.17 - - - - - - - - - - -
............................................................................................................GGCGGCGGCGGCGACTttgg.................................................................................................................... 20 ttgg 0.06 0.56 - 0.06 - - - - - - - - - - - - - - - - - - - - - - - -

Antisense strand
CGAGCCGAGGGAGTGAGCCGGGCGGAGCCAGCGCCCCCCGCCCCCCGCCGGCCGGCTCCCCTCCCCCGGCCGCTGGCTCGCTCGCTCTCAGCGCTGCAGAGGCTCTGAGGCGGCGGCGGCGACTCCCTCATCCCCTCCCTCCGGTGTCGGTCGGTCCGCCTGTGCGTGCGTCTGTCCGTTCGGCCTCGGTCCGGCCCGCAGCATGGCCGGCGTCAGCTTCAGCGGCCACCGCCTGGAGCTGCTG


Size Perfect hit Total Norm Perfect Norm mjTestesWT1()
Testes Data. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
mjTestesWT2()
Testes Data. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
mjTestesWT4()
Testes Data. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
mjTestesWT3()
Testes Data. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR037902(GSM510438)
testes_rep3. (testes)
..................................................................................................................................................................TGCGTGCGTCTGTCCGTTCGGCCTCGGTCCG................................................... 31 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
................................CCCGCCCCCCGCCGGtcgg................................................................................................................................................................................................. 19 tcgg 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...............................CCCCGCCCCCCGCCGGcgga................................................................................................................................................................................................. 20 cgga 1.00 0.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
...............................CCCCGCCCCCCGCCGtggt.................................................................................................................................................................................................. 19 tggt 1.00 0.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
................................CCCCGCCCCCCGCCGGcgg................................................................................................................................................................................................. 19 cgg 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................TCGGTCCGCCTGTGgctc................................................................................ 18 gctc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00