| Gene: Grk6 | ID: uc007qqw.1_intron_4_0_chr13_55552390_f | SPECIES: mm9 |
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(1) OTHER.ip |
(4) OTHER.mut |
(5) PIWI.ip |
(1) PIWI.mut |
(22) TESTES |
| CAGCGGCTAGAGCAGGGACCCTGCAAAGACCTCTTCCAGGAGCTGACCCGGTAAGGCTCCATACCTCCTGGTCTGGAATTGTTCCAGGGAAGGGGGCTTCTGTGGGCTCTGAAGTCTGTGACAAGCTCAGCTCCTCTTCCTGTCCGCGTTGTTGGAGTTTAGCAGTTGCCTCCCATCCCTGCTTCAGTGTAGAGTGCATGCACCCTCCTGCTCAGGGCCTCAGTGAGAAGCTTGCCGAAGGAAAAGGATGTTGCTTTGTGTCTGACCGGCATGTAGTGGGAGGCCTGTGCCTTCAGGCTGAGAATTGGCCTTGTTAGAGGCTCGCCTACAGACTGATCCTCTCTCAACAGGCTGACCCACGAGTACCTGAGCACGGCCCCTTTTGCCGACTACCTCGACA ...................................................................................................................................................................................................................................................................(((((...(((...((((.((((((....))))))..))))......((((((....)))))).)))..)))))................................................................... ..........................................................................................................................................................................................................................................................251................................................................................................350................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................................................................................................................GAAAAGGATGTTGCTTTGTGTCTGACC..................................................................................................................................... | 27 | 1 | 38.00 | 38.00 | 10.00 | 10.00 | 9.00 | - | 4.00 | 4.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................CGCCTACAGACTGATCCTCTCTCAACAG.................................................. | 28 | 1 | 5.00 | 5.00 | - | - | - | - | - | - | - | 2.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................TGACCCACGAGTACCTGAGCACGGCCCC.................... | 28 | 1 | 5.00 | 5.00 | - | - | - | 1.00 | - | - | 3.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................GGAAAAGGATGTTGCTTTGTGTCTGACC..................................................................................................................................... | 28 | 1 | 5.00 | 5.00 | 3.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................TGTTGCTTTGTGTCTGACC..................................................................................................................................... | 19 | 1 | 3.00 | 3.00 | 1.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................ACGAGTACCTGAGCACGGCCC..................... | 21 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................TGACCCACGAGTACCTGAGCACGGCCC..................... | 27 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................GAAAAGGATGTTGCTTTGTGTCTGAtc..................................................................................................................................... | 27 | tc | 2.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .................................................................................................................................................................................................................................................................................................................................................................GACCCACGAGTACCTGAGCACGGCCCC.................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................CATGTAGTGGGAGGCCTGTGCCTTCA......................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................TGCAAAGACCTCTTCCAGGAGCTGACCC............................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................AAGGAAAAGGATGTTGCTTTGTGTC.......................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................GACCCACGAGTACCTGAGCACGGC....................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ........................................................................................................................................................................................................................................................................................................................................CAGACTGATCCTCTCTCAACAGaa................................................ | 24 | aa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAAGGCTCCATACCTCCTGGTCTGa.................................................................................................................................................................................................................................................................................................................................... | 26 | a | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................ACGAGTACCTGAGCACGGCCCCTTT................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ................................................................................................................................................................................................................................................GAAAAGGATGTTGCTTTGTGTCTGAac..................................................................................................................................... | 27 | ac | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................TACCTGAGCACGGCCCCTTTTGCCGAC.......... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................CTTCAGTGTAGAGTaact......................................................................................................................................................................................................... | 18 | aact | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................GTAAGGCTCCATACCTCCTGGTCTGG.................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................AGTGGGAGGCCTGTGata............................................................................................................ | 18 | ata | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................TGCAAAGACCTCTTCCAGGAGCTGACCCG.............................................................................................................................................................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ................................................................................................................................................................................................................................................GAAAAGGATGTTGCTTTGTGTCTGAC...................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................TACCTGAGCACGGCCCCTTTTGCCGACT......... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................GAAAAGGATGTTGCTTTGTGTCTtacc..................................................................................................................................... | 27 | tacc | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................CCGCGTTGTTGGAGTTTAGC............................................................................................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................TGACCCACGAGTACCTGAGCACGGCCCCT................... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................GCTGACCCACGAGTACCTGAGCACGGCC...................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................ACAGACTGATCCTCTCTCAACAGa................................................. | 24 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| CAGCGGCTAGAGCAGGGACCCTGCAAAGACCTCTTCCAGGAGCTGACCCGGTAAGGCTCCATACCTCCTGGTCTGGAATTGTTCCAGGGAAGGGGGCTTCTGTGGGCTCTGAAGTCTGTGACAAGCTCAGCTCCTCTTCCTGTCCGCGTTGTTGGAGTTTAGCAGTTGCCTCCCATCCCTGCTTCAGTGTAGAGTGCATGCACCCTCCTGCTCAGGGCCTCAGTGAGAAGCTTGCCGAAGGAAAAGGATGTTGCTTTGTGTCTGACCGGCATGTAGTGGGAGGCCTGTGCCTTCAGGCTGAGAATTGGCCTTGTTAGAGGCTCGCCTACAGACTGATCCTCTCTCAACAGGCTGACCCACGAGTACCTGAGCACGGCCCCTTTTGCCGACTACCTCGACA ...................................................................................................................................................................................................................................................................(((((...(((...((((.((((((....))))))..))))......((((((....)))))).)))..)))))................................................................... ..........................................................................................................................................................................................................................................................251................................................................................................350................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................TTGTTCCAGGGAAGcagt.................................................................................................................................................................................................................................................................................................................... | 18 | cagt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................TTTTGCCGACTtgga......... | 15 | tgga | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................CTCAGTGAGAAGCTTcgtc....................................................................................................................................................................... | 19 | cgtc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |