| Gene: Fgfr4 | ID: uc007qqb.1_intron_14_0_chr13_55268520_f | SPECIES: mm9 |
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(6) OTHER.mut |
(4) PIWI.ip |
(2) PIWI.mut |
(19) TESTES |
| ATGGCTCCAGAGGCATTGTTCGACCGCGTGTACACACACCAGAGTGACGTGTGAGTCTGGGAAATGGGTTCTAAGATGGCTGCTGCCTGTCTTCAAGTCGTCATCCCCTCTAAAAGGGCAAGGCGCTTGCCAAAGTCACGAGATCTTAGGAGTTCTTCTGACACTCCAAAAGAAAGGAGTGCCCCTCCCTATCCCCAAGGGTGGATCTTGACCGCAATAGCCTTTACTACAGCTTCAAGGAGAAAGGAAGGAAGGAAGCTGGGCCCTGCTGAGCCACAGTTCTGCCTCCAGGTGGTCTTTCGGGATCCTGCTGTGGGAAATCTTCACCCTCGGGGGCTCCC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................TGGGAAATGGGTTCTAAGATGGCTGC.................................................................................................................................................................................................................................................................. | 26 | 1 | 39.00 | 39.00 | 12.00 | 7.00 | 4.00 | 4.00 | 1.00 | 1.00 | 4.00 | - | - | 2.00 | 1.00 | - | 1.00 | 1.00 | - | 1.00 | - | - | - |
| .........................................................TGGGAAATGGGTTCTAAGATGGCTG................................................................................................................................................................................................................................................................... | 25 | 1 | 7.00 | 7.00 | - | - | - | 1.00 | 1.00 | - | - | 1.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................TGAGTCTGGGAAATGGGTTCTAAGATGGC..................................................................................................................................................................................................................................................................... | 29 | 1 | 6.00 | 6.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................................................................................TCAAGTCGTCATCCCCTCTAAAAGGGCAAGG.......................................................................................................................................................................................................................... | 31 | 1 | 3.00 | 3.00 | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................TGGGAAATGGGTTCTAAGATGGCTGCTGCCTGT........................................................................................................................................................................................................................................................... | 33 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................TACACACACCAGAGTGACGTGTGAGTC............................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................................CAGAGTGACGTGTGAGTCTGGGAAATGGG................................................................................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...GCTCCAGAGGCATTGTTCGACCGCGTG....................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................TGGGAAATGGGTTCTAAGATGGttgc.................................................................................................................................................................................................................................................................. | 26 | ttgc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................TTCGGGATCCTGCTGTGGGAAATCTTC................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............................................................................................................................TGCCAAAGTCACGAGATCTTAGGAGT............................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................CGAGATCTTAGGAGTTCTTCTGACACTCC.............................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TGCCAAAGTCACGAGATCTTAGGAGTT........................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...........................................GTGACGTGTGAGTCTGGGAAATtgg................................................................................................................................................................................................................................................................................. | 25 | tgg | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ATGGCTCCAGAGGCATTGTTCGACCGCGTGTACACACACCAGAGTGACGTGTGAGTCTGGGAAATGGGTTCTAAGATGGCTGCTGCCTGTCTTCAAGTCGTCATCCCCTCTAAAAGGGCAAGGCGCTTGCCAAAGTCACGAGATCTTAGGAGTTCTTCTGACACTCCAAAAGAAAGGAGTGCCCCTCCCTATCCCCAAGGGTGGATCTTGACCGCAATAGCCTTTACTACAGCTTCAAGGAGAAAGGAAGGAAGGAAGCTGGGCCCTGCTGAGCCACAGTTCTGCCTCCAGGTGGTCTTTCGGGATCCTGCTGTGGGAAATCTTCACCCTCGGGGGCTCCC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................GCGCTTGCCAAAGTCACGAGATCTTA................................................................................................................................................................................................. | 26 | 1 | 7.00 | 7.00 | - | 2.00 | 1.00 | 1.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................................................................................CTGTCTTCAAGTCGTCATCCCCTCTAa..................................................................................................................................................................................................................................... | 27 | a | 5.00 | 0.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................GCCTGTCTTCAAGTCGTCATCCCCTCTA..................................................................................................................................................................................................................................... | 28 | 1 | 3.00 | 3.00 | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................ATCCCCAAGGGTGGATtga....................................................................................................................................... | 19 | tga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................................................................................................................................................................................CCGCAATAGCCTTTACTACAGCTTCAAg....................................................................................................... | 28 | g | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................CGCTTGCCAAAGTCACGAGATCTTA................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................GTCACGAGATCTTAGGAGTTCTTCTGA.................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................CTGTCTTCAAGTCGTCATCCCCTCTAt..................................................................................................................................................................................................................................... | 27 | t | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................CTGCCTGTCTTCAAGTCGTCATCCCC......................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |