(5)
OTHER.mut
(4)
PIWI.ip
(1)
PIWI.mut
(25)
TESTES

Sense strand
GCACCCCGCATCGCGAACAAAGGAGCCCGCGTGTGGTCGGACGGCTGCCGGTGAGTCGGGCCGGGCCTCTTAACTTCGGACCCGCACCCCGGAACTACGGCTCCCTCGGGGACGCGTTGTTTGCCGGCCTCGTAGGCGTCGATCCCGGGCTGAGGGAGTGGTGGGAGACGGCGGCGGGGCCCCCGGGCCAGGTGCTGCCTGCGGCTACCTAGTCCGGGCCGCTCTTCTGCCTTGCAGAGCGCTGCGGTGG


Size Perfect hit Total Norm Perfect Norm mjTestesWT4()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT3()
Testes Data. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR014235(GSM319959)
2 dpp total. (testes)
mjTestesWT2()
Testes Data. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
........................................................................ACTTCGGACCCGCACCCCGGAACTACGGCT.................................................................................................................................................... 30 1 10.00 10.00 10.00 - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................TAGGCGTCGATCCCGGGCTGAGGGAG............................................................................................ 26 1 3.00 3.00 - - - - - - - - - - 2.00 - 1.00 - - - - - - - - - - - -
..........TCGCGAACAAAGGAGCCCGCGTGTGGTC.................................................................................................................................................................................................................... 28 1 3.00 3.00 - 1.00 - - - - - - - - 1.00 - - - - - 1.00 - - - - - - - -
..........................................................................TTCGGACCCGCACCCCGGAACTACGGC..................................................................................................................................................... 27 1 2.00 2.00 - - 2.00 - - - - - - - - - - - - - - - - - - - - - -
................ACAAAGGAGCCCGCGTGTGGTCGGACG............................................................................................................................................................................................................... 27 1 2.00 2.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - 1.00 -
......................................................................................................................................GGCGTCGATCCCGGGCTGAGGGAGTG.......................................................................................... 26 1 2.00 2.00 - 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
................ACAAAGGAGCCCGCGTGTGGTCGGA................................................................................................................................................................................................................. 25 1 2.00 2.00 - - - - - - 1.00 - - - - - - - - - - - - - 1.00 - - - -
................................................................................................................................................................................................................................TTCTGCCTTGCAGAGCGCTGCGGTGa 26 a 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................GTTGTTTGCCGGCCTCGTAGGCGTCGA............................................................................................................ 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
..........TCGCGAACAAAGGAGCCCGCGTGTGt...................................................................................................................................................................................................................... 26 t 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
.................................TGGTCGGACGGCTGCCGGTGAGTCGGGCC............................................................................................................................................................................................ 29 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
................ACAAAGGAGCCCGCGTGTGGTCGGACGG.............................................................................................................................................................................................................. 28 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
..................AAAGGAGCCCGCGTGTGGTCGGACGGCTGC.......................................................................................................................................................................................................... 30 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
..........TCGCGAACAAAGGAGCCCGCGTGTGG...................................................................................................................................................................................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
......................GAGCCCGCGTGTGGTCGGACGGCTGCCG........................................................................................................................................................................................................ 28 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
...............................TGTGGTCGGACGGCTGCCGGTGAGTC................................................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
....................................................................................................................................TAGGCGTCGATCCCGGGCTGAGGGAGT........................................................................................... 27 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
....................AGGAGCCCGCGTGTGGTCGGACGGCTG........................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
...............................TGTGGTCGGACGGCTGCCG........................................................................................................................................................................................................ 19 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.....................................................................................................................................AGGCGTCGATCCCGGGCTGA................................................................................................. 20 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
................................GTGGTCGGACGGCTGCCG........................................................................................................................................................................................................ 18 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................TAGGCGTCGATCCCGGGCTGAGGG.............................................................................................. 24 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
....................................................................................................................................TAGGCGTCGATCCCGGGCTGAGGGAGTGG......................................................................................... 29 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.................................TGGTCGGACGGCTGCCGG....................................................................................................................................................................................................... 18 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
............GCGAACAAAGGAGCCCGCG........................................................................................................................................................................................................................... 19 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
...........................................................................TCGGACCCGCACCCCGGAACTACGGCTC................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
....................................................................................................................................TAGGCGTCGATCCCGGGCTGAGGGA............................................................................................. 25 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................TAGGCGTCGATCCCGGGCTGAGGGAGag.......................................................................................... 28 ag 1.00 3.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
.................................TGGTCGGACGGCTGCCGGTGAGTCGGG.............................................................................................................................................................................................. 27 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
.............................................................................................................................................................................................................TACCTAGTCCGGGCCGCTCTTCTGCC................... 26 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
...................................................................TCTTAACTTCGGACCCGCACCCCGG.............................................................................................................................................................. 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................TAGGCGTCGATCCCGGGCTGAGGGAa............................................................................................ 26 a 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................TAGGCGTCGATCCCGGGCTGAGG............................................................................................... 23 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
................ACAAAGGAGCCCGCGTGTGGTCGGAC................................................................................................................................................................................................................ 26 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - -

Antisense strand
GCACCCCGCATCGCGAACAAAGGAGCCCGCGTGTGGTCGGACGGCTGCCGGTGAGTCGGGCCGGGCCTCTTAACTTCGGACCCGCACCCCGGAACTACGGCTCCCTCGGGGACGCGTTGTTTGCCGGCCTCGTAGGCGTCGATCCCGGGCTGAGGGAGTGGTGGGAGACGGCGGCGGGGCCCCCGGGCCAGGTGCTGCCTGCGGCTACCTAGTCCGGGCCGCTCTTCTGCCTTGCAGAGCGCTGCGGTGG


Size Perfect hit Total Norm Perfect Norm mjTestesWT4()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT3()
Testes Data. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR014235(GSM319959)
2 dpp total. (testes)
mjTestesWT2()
Testes Data. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
....................................................................................................................................................................................................CCTGCGGCTACCTAGTCCGa.................................. 20 a 6.00 0.00 - - - - - 6.00 - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................GCCTGCGGCTACCTAGTCCGG................................. 21 1 6.00 6.00 6.00 - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................GCGGCTACCTAGTCCG.................................. 16 1 4.00 4.00 - - - - 1.00 - 3.00 - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................GCCGCTCTTCTGCCTTGCAGAGCGC........ 25 1 3.00 3.00 3.00 - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................CTTCTGCCTTGCAGAGCGCTGCG.... 23 1 3.00 3.00 - - 3.00 - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................CCTGCGGCTACCTAGTCCG.................................. 19 1 3.00 3.00 - - 3.00 - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................CCAGGTGCTGCCTGCGGCTACCTA....................................... 24 1 2.00 2.00 - 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................GGCTACCTAGTCCGGGCCG............................. 19 1 2.00 2.00 - - - - - - - - - - - - - - - - - - 2.00 - - - - - -
..........................................................................................................................................................................................GCCAGGTGCTGCCTGCGGCTACCTAGTCCGG................................. 31 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................CTGCCTGCGGCTACCTAGTCCGGGCCG............................. 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................TGCGGCTACCTAGTCCGGGCCG............................. 22 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.........................................................................................................................................GTCGATCCCGGGCTGAGGGAGTGGT........................................................................................ 25 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................CTGCGGCTACCTAGTCCGGGCCG............................. 23 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................CCTAGTCCGGGCCGCTCTTCTGCCca................... 26 ca 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................TAGTCCGGGCCGCTCTTCTGCCTTGCAt.............. 28 t 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
..................................................................................................................................................................................................CTGCCTGCGGCTACCTAGTCCG.................................. 22 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................AGTCCGGGCCGCTCTTCTGCCTTGCA.............. 26 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
...................................................................................................................................................................................................TGCCTGCGGCTACCTAGTCCGGGCCG............................. 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................CGGGCCAGGTGCTGCCTGCGGCTACCTA....................................... 28 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.............................................................................................................................................................................................................TACCTAGTCCGGGCCGCTCTTCT...................... 23 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................GCCAGGTGCTGCCTGCGG.............................................. 18 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
........................................................................................................................................................................................................GCGGCTACCTAGTCCGGGC............................... 19 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
....................................................................................................................................................................................................GCCTGCGGCTACCTAGTCCG.................................. 20 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................AGGTGCTGCCTGCGGCTACCTAGTCCG.................................. 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00
.......................................................................................................................................................................................................................................CAGAGCGCTGCGGTacc.. 17 acc 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................GCTACCTAGTCCGGGCCG............................. 18 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................GCCAGGTGCTGCCTGCGGCTACCTA....................................... 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
.................................................................................................................................................................................................................................TCTGCCTTGCAGAGCGCT....... 18 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................TTCTGCCTTGCAGAGCGCTG...... 20 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................AGTCCGGGCCGCTCTTCTG..................... 19 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................TGCGGCTACCTAGTCCG.................................. 17 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..........CGAACAAAGGAGtcg................................................................................................................................................................................................................................. 15 tcg 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................CTACCTAGTCCGGGCCG............................. 17 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
....................................................................................................................................TAGGCGTCGATCCCGGGCTGAGGGA............................................................................................. 25 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................ACCTAGTCCGGGCCGCTCTTCTGC.................... 24 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - -