(6)
OTHER.mut
(5)
PIWI.ip
(2)
PIWI.mut
(29)
TESTES

Sense strand
CAGGGCTGTCTGACCGCTGGCGTCTACGAGTCCGCCAAAGTCCTGAATGTGTGAGTGTAGAAAGGCCCCGCGTGCAGGGATTGGGGTTGGCGCGGCGCGGAGACCTGGGGGTGGCATCGACTCTGACCTTGTCCTTCCCATCTGCTCTGCAGGGACCCTGACAATGTGACCTTTTGCGTGCTGGCTGCCGATGAAGAAGATG
......................................................((((.....(((((((...........))))))).))))...((((((...((((((.(((((((....)))...)))).))))))....))))))....................................................
..................................................51...................................................................................................152................................................
Size Perfect hit Total Norm Perfect Norm mjTestesWT4()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR014236(GSM319960)
10 dpp total. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesWT2()
Testes Data. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
mjTestesWT3()
Testes Data. (testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR037903(GSM510439)
testes_rep4. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
..................................................GTGAGTGTAGAAAGGCCCCGCGTGCA.............................................................................................................................. 26 1 14.00 14.00 - - - 1.00 - 6.00 4.00 - - - - 2.00 1.00 - - - - - - - - - - - - - - - -
..............................................................................................................................................................TGACAATGTGACCTTTTGCGTGCTGGC................. 27 1 7.00 7.00 - 2.00 - 1.00 - - 1.00 - 1.00 - - - - 1.00 - - - - - - - - - 1.00 - - - - -
..............................................................................................................................................................TGACAATGTGACCTTTTGCGTGCTG................... 25 1 7.00 7.00 6.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
..................................................GTGAGTGTAGAAAGGCCCCGCGTGC............................................................................................................................... 25 1 6.00 6.00 - 1.00 2.00 1.00 - 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - -
....GCTGTCTGACCGCTGGC..................................................................................................................................................................................... 17 1 6.00 6.00 - - - - - - - 6.00 - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................TCCTTCCCATCTGCTCTGCAGt................................................. 22 t 5.00 0.00 - - - - 1.00 - - - - 1.00 1.00 - - - - - - 1.00 1.00 - - - - - - - - - -
..................................................GTGAGTGTAGAAAGGCCCCGCGTGCAG............................................................................................................................. 27 1 4.00 4.00 - - - 1.00 - 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - -
...................................................TGAGTGTAGAAAGGCCCCGCGTGCAG............................................................................................................................. 26 1 3.00 3.00 - - - 1.00 - - - - 2.00 - - - - - - - - - - - - - - - - - - - -
............................................................................................CGGCGCGGAGACCTGGGGGTGGCA...................................................................................... 24 1 3.00 3.00 3.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................ATGTGTGAGTGTAGAAAGGC........................................................................................................................................ 20 1 3.00 3.00 - - - - - - - - - - 3.00 - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................CTGGCTGCCGATGAAGAAGATG 22 1 2.00 2.00 - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - - -
..................................................GTGAGTGTAGAAAGGCCCCGCGTGCAt............................................................................................................................. 27 t 2.00 14.00 - - - - - - - - - - - 2.00 - - - - - - - - - - - - - - - - -
...........................................TGAATGTGTGAGTGTAGAAAGGCCCC..................................................................................................................................... 26 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................TGACAATGTGACCTTTTGCGTGCTGGCT................ 28 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................TGTCCTTCCCATCTGCTCTGCAGt................................................. 24 t 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
........................TACGAGTCCGCCAAAGTCCTGAATGT........................................................................................................................................................ 26 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
................................................GTGTGAGTGTAGAAAGGCCC...................................................................................................................................... 20 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
...................................................................................GGGTTGGCGCGGtcg........................................................................................................ 15 tcg 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
...................................................................................................................................TCCTTCCCATCTGCTCTGCAt.................................................. 21 t 1.00 0.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
...................................................................................GGGTTGGCGCGGtcgc....................................................................................................... 16 tcgc 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................TGACAATGTGACCTTTTGCGTGCTGG.................. 26 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................TCGACTCTGACCTTGTCCTTCCCATC............................................................ 26 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
...................................................................................................................................TCCTTCCCATCTGCTCTGCAa.................................................. 21 a 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..................................................GTGAGTGTAGAAAGGCCCCGCGTGCAGGGATT........................................................................................................................ 32 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................GAATGTGTGAGTGTAGAAA........................................................................................................................................... 19 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
...................................................TGAGTGTAGAAAGGCCCCGCGTGCA.............................................................................................................................. 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00
...................................................................................................................................TCCTTCCCATCTGCTCTGCAGtt................................................ 23 tt 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
..................................................GTGAGTGTAGAAAGGCCC...................................................................................................................................... 18 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
......................................................................................................................................................................TGACCTTTTGCGTGCTGGC................. 19 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
........................TACGAGTCCGCCAAAGTCCTGAATGgacc..................................................................................................................................................... 29 gacc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
................................................................................................................................................................ACAATGTGACCTTTTGCGTGCTGGCT................ 26 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -

Antisense strand
CAGGGCTGTCTGACCGCTGGCGTCTACGAGTCCGCCAAAGTCCTGAATGTGTGAGTGTAGAAAGGCCCCGCGTGCAGGGATTGGGGTTGGCGCGGCGCGGAGACCTGGGGGTGGCATCGACTCTGACCTTGTCCTTCCCATCTGCTCTGCAGGGACCCTGACAATGTGACCTTTTGCGTGCTGGCTGCCGATGAAGAAGATG
......................................................((((.....(((((((...........))))))).))))...((((((...((((((.(((((((....)))...)))).))))))....))))))....................................................
..................................................51...................................................................................................152................................................
Size Perfect hit Total Norm Perfect Norm mjTestesWT4()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR014236(GSM319960)
10 dpp total. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesWT2()
Testes Data. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
mjTestesWT3()
Testes Data. (testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR037903(GSM510439)
testes_rep4. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
...............................CCGCCAAAGTCCTGAATGTGTGAGTGTA............................................................................................................................................... 28 1 14.00 14.00 14.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................CCTTGTCCTTCCCATCTGCTCTGCA................................................... 25 1 8.00 8.00 - 1.00 4.00 - 3.00 - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................CTTGTCCTTCCCATCTGCTCTGCA................................................... 24 1 3.00 3.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
............................................................................................................................GACCTTGTCCTTCCCATCTGCTCTGCA................................................... 27 1 2.00 2.00 - - - - 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - -
.................................GCCAAAGTCCTGAATGTGTGAGTGTAGA............................................................................................................................................. 28 1 2.00 2.00 - - - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - -
.............................................................................................................................CCTTGTCCTTCCCATCTGCTCTGCAa................................................... 26 a 2.00 0.00 - 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................ACCTTGTCCTTCCCATCTGCTCTGCA................................................... 26 1 2.00 2.00 - - 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................CATCGACTCTGACCTTGTCCTTCCCAt.............................................................. 27 t 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................TTGTCCTTCCCATCTGCTCTGCA................................................... 23 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................GCATCGACTCTGACCTTGTCCTTCCCA.............................................................. 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..GGGCTGTCTGACCGCTGGCGTCTACGA............................................................................................................................................................................. 27 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
....................................AAAGTCCTGAATGTGTGAGTGTAGAA............................................................................................................................................ 26 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...................GCGTCTACGAGTCCGCCAAAGTCCT.............................................................................................................................................................. 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
................................CGCCAAAGTCCTGAATGTGTGAGTGTA............................................................................................................................................... 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
....................CGTCTACGAGTCCGCCAAAGTCC............................................................................................................................................................... 23 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
..................................................................................................................................................CTGCAGGGACCCTGACAATGTGACCTTT............................ 28 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
................................................................................................................GGCATCGACTCTGACCTTGTCCTTCCCA.............................................................. 28 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
............................................GTGTGAGTGTAGAAcatc............................................................................................................................................ 18 catc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
.........................................................................................................................................CCATCTGCTCTGCAGGGACCCTGACA....................................... 26 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
..........................................................................................................................CTGACCTTGTCCTTCCCATCTGCTC....................................................... 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................GTCTACGAGTCCGCCAAAGTCCTGA............................................................................................................................................................ 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................ACCTTTTGCGTGCTGGCTG............... 19 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
.......GTCTGACCGCTGGCGTCT................................................................................................................................................................................. 18 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.............CCGCTGGCGTCTACGAGT........................................................................................................................................................................... 18 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
......................TCTACGAGTCCGCCAAAGTCCTGAA........................................................................................................................................................... 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................GACCTTTTGCGTGCTGGCTGCCGATGAA....... 28 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..................................CCAAAGTCCTGAATGTGTGAGTGTAGAA............................................................................................................................................ 28 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
................................CGCCAAAGTCCTGAATGTGTG..................................................................................................................................................... 21 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
..........................CGAGTCCGCCAAAGTCCT.............................................................................................................................................................. 18 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
..............................................................................................................................TTGTCCTTCCCATCTGCTCTGCAaa................................................... 25 aa 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...........GACCGCTGGCGTCTACGAG............................................................................................................................................................................ 19 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................TGCGTGCTGGCTGCCGATGAAGAAGA.. 26 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -