| Gene: Jarid2 | ID: uc007qgv.1_intron_9_0_chr13_45005977_f.5p | SPECIES: mm9 |
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(3) OTHER.mut |
(16) TESTES |
| CCTCCCAAATAACACAGGGTCCATCCTGCGTCACCTTGGTGCTGTGCCTGGTAAGTATGACCTGATCTCTTCTGGCTTCATCGTGAGAACAGAGCCGGGTGGCTCACTAGTAGAGAGGCCTGGGGCCTTGGGGCCAGAGTCCATGCAGTTTGATGAAATCTGAAAACTGTGGACCCCCGAATAGCTGAGGCATCTAGTTAAAATCAGAGTATCAGAAAAGGCTTTTCAATATTAATCCTGACTCCTGAAG .....................................................................................................((((.........((((((...)))))).))))....((((..(((((((............)))))))))))............................................................................ .....................................................................................................102......................................................................175......................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR037903(GSM510439) testes_rep4. (testes) |
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| ................................................................................................................................................GCAGTTTGATGAAATCTGAAAACTGTG............................................................................... | 27 | 1 | 698.00 | 698.00 | 224.00 | 162.00 | 119.00 | 103.00 | 88.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - |
| .................................................................................................................................................CAGTTTGATGAAATCTGAAA..................................................................................... | 20 | 1 | 18.00 | 18.00 | 3.00 | - | 1.00 | - | - | 6.00 | 2.00 | 1.00 | 1.00 | 1.00 | 2.00 | - | - | 1.00 | - | - |
| ................................................................................................................................................GCAGTTTGATGAAATCTGAAA..................................................................................... | 21 | 1 | 8.00 | 8.00 | - | 1.00 | - | - | - | 5.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................................................................GCAGTTTGATGAAATCTGAAAACTGTa............................................................................... | 27 | a | 6.00 | 2.00 | 2.00 | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................CAGTTTGATGAAATCTGAAAACTGT................................................................................ | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - |
| ................................................................................................................................................GCAGTTTGATGAAATCTGAAAACTGT................................................................................ | 26 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................CAGTTTGATGAAATCTGAtc..................................................................................... | 20 | tc | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................GCAGTTTGATGAAATCTGAA...................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................GTTTGATGAAATCTGAAAACTGTG............................................................................... | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................GCAGTTTGATGAAATCTGAAAACTG................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................CAGTTTGATGAAATCTGAAAACTGTG............................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................................................................................................................................GCAGTTTGATGAAATCTGAAAACTGag............................................................................... | 27 | ag | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................TTGATGAAATCTGAAAACTGTG............................................................................... | 22 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................CTAGTAGAGAGGCCTcact............................................................................................................................. | 19 | cact | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| CCTCCCAAATAACACAGGGTCCATCCTGCGTCACCTTGGTGCTGTGCCTGGTAAGTATGACCTGATCTCTTCTGGCTTCATCGTGAGAACAGAGCCGGGTGGCTCACTAGTAGAGAGGCCTGGGGCCTTGGGGCCAGAGTCCATGCAGTTTGATGAAATCTGAAAACTGTGGACCCCCGAATAGCTGAGGCATCTAGTTAAAATCAGAGTATCAGAAAAGGCTTTTCAATATTAATCCTGACTCCTGAAG .....................................................................................................((((.........((((((...)))))).))))....((((..(((((((............)))))))))))............................................................................ .....................................................................................................102......................................................................175......................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR037903(GSM510439) testes_rep4. (testes) |
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| ...........................................................GATCTCTTCTGGCTcaaa............................................................................................................................................................................. | 18 | caaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |