| Gene: Tmem14c | ID: uc007qet.1_intron_1_0_chr13_41112543_f.5p | SPECIES: mm9 |
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(3) OTHER.mut |
(4) PIWI.ip |
(2) PIWI.mut |
(20) TESTES |
| TGGTGTGGTCTCCAAAGCGACTGAACAATGCAGAAAGACAGTGGCCCATTGTAAGTGCCCTGTGCATCGGAGTAGAATCACTGGGAGCCTCTAAAACCAGAGCACATGACGGGAACCTCCAGCTTGGCACTGCCCACCAGGCAGCGTAGGTTGTGACATGATCCTTGAACTAGCGGCCTGGGACATGGACTTGAATCCAGTTCTGCCACTGGCTAGTTCTTTCACCGAGCCTGCCACCTGGCCTATCTTT ................................................................................................((((.((.......((((...((((((((.((.(((((.....))))).)))))))).)).....))))..........))))))..................................................................... ..............................................................................................95......................................................................................183................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........TCCAAAGCGACTGAACAATGCAGAAAGAC................................................................................................................................................................................................................... | 29 | 1 | 31.00 | 31.00 | 7.00 | 9.00 | 4.00 | 7.00 | - | 1.00 | - | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| ..........TCCAAAGCGACTGAACAATGCAGAAAGA.................................................................................................................................................................................................................... | 28 | 1 | 24.00 | 24.00 | 5.00 | 7.00 | 2.00 | 3.00 | 1.00 | - | - | - | 5.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..........TCCAAAGCGACTGAACAATGCAGAAAGACA.................................................................................................................................................................................................................. | 30 | 1 | 15.00 | 15.00 | 1.00 | - | 6.00 | - | 1.00 | - | - | - | 6.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................TGCAGAAAGACAGTGGCCCATTGatgc................................................................................................................................................................................................... | 27 | atgc | 13.00 | 0.00 | 2.00 | 7.00 | 1.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........TCCAAAGCGACTGAACAATGCAGAAAG..................................................................................................................................................................................................................... | 27 | 1 | 11.00 | 11.00 | 1.00 | 1.00 | 4.00 | 2.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - |
| .......................................................................................................................................................TGTGACATGATCCTTGAACTAGCGGCCT....................................................................... | 28 | 1 | 9.00 | 9.00 | 2.00 | 2.00 | - | 2.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........TCCAAAGCGACTGAACAATGCAGAAA...................................................................................................................................................................................................................... | 26 | 1 | 9.00 | 9.00 | 5.00 | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................TGAACAATGCAGAAAGACAGTGGCCCA.......................................................................................................................................................................................................... | 27 | 1 | 8.00 | 8.00 | 1.00 | - | - | 1.00 | 1.00 | - | - | - | - | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - |
| .....................TGAACAATGCAGAAAGACAGTGGCCCAT......................................................................................................................................................................................................... | 28 | 1 | 7.00 | 7.00 | 2.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .........................................................................................................................................................TGACATGATCCTTGAACTAGCGGCCT....................................................................... | 26 | 1 | 7.00 | 7.00 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................TGTGACATGATCCTTGAACTAGCGGCC........................................................................ | 27 | 1 | 6.00 | 6.00 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................CTGAACAATGCAGAAAGACAGTGGCCC........................................................................................................................................................................................................... | 27 | 1 | 6.00 | 6.00 | - | - | - | - | - | - | 5.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ............................................................TGTGCATCGGAGTAGAATCACTGGGAGC.................................................................................................................................................................. | 28 | 1 | 5.00 | 5.00 | - | - | - | - | - | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............AAGCGACTGAACAATGCAGAAAGACAG................................................................................................................................................................................................................. | 27 | 1 | 5.00 | 5.00 | 1.00 | - | 1.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............AGCGACTGAACAATGCAGAA....................................................................................................................................................................................................................... | 20 | 1 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | 4.00 | - | - | - | - | - | - | - |
| ...........CCAAAGCGACTGAACAATGCAGAAAGAC................................................................................................................................................................................................................... | 28 | 1 | 4.00 | 4.00 | - | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............CAAAGCGACTGAACAATGCAGAAAGAC................................................................................................................................................................................................................... | 27 | 1 | 4.00 | 4.00 | 1.00 | 1.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TGACATGATCCTTGAACTAGCGGCCTG...................................................................... | 27 | 1 | 4.00 | 4.00 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........CCAAAGCGACTGAACAATGCAGAAAGACA.................................................................................................................................................................................................................. | 29 | 1 | 3.00 | 3.00 | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................TGTGACATGATCCTTGAACTAGCGGC......................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............AGCGACTGAACAATGCAGAAAGACAGT................................................................................................................................................................................................................ | 27 | 1 | 3.00 | 3.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............CAAAGCGACTGAACAATGCAGAAAGACA.................................................................................................................................................................................................................. | 28 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................TGCAGAAAGACAGTGGCCCATTGatg.................................................................................................................................................................................................... | 26 | atg | 2.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........TCCAAAGCGACTGAACAATGCAGAAAGAt................................................................................................................................................................................................................... | 29 | t | 2.00 | 24.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....TGGTCTCCAAAGCGACTGAACAATGCAG......................................................................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........TCCAAAGCGACTGAACAATGCAGAA....................................................................................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........TCTCCAAAGCGACTGAACAATGCAGAA....................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....TGGTCTCCAAAGCGACTGAACAATGCAGAAAGA.................................................................................................................................................................................................................... | 33 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........CCAAAGCGACTGAACAATGCAGAAAGA.................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................AACCAGAGCACATGACGGGAACCTCCA................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........CCAAAGCGACTGAACAATGCAGAAAG..................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........TCCAAAGCGACTGAACAATGCAGAAAaa.................................................................................................................................................................................................................... | 28 | aa | 2.00 | 9.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................GAGCACATGACGGGAACCTCCAGCTT............................................................................................................................. | 26 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TAAAACCAGAGCACATGACGGGAACCTC................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................TGCATCGGAGTAGAATCACTGGGAGCC................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................TGAACAATGCAGAAAGAC................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........CCAAAGCGACTGAACAATGCAGAAAGAa................................................................................................................................................................................................................... | 28 | a | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............CAAAGCGACTGAACAATGCAGAAAGA.................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................CTGAACAATGCAGAAAGACAGTGGCCCATTGa...................................................................................................................................................................................................... | 32 | a | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................GGTTGTGACATGATCCTTGAACTAGCGGC......................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................TGTAAGTGCCCTGTGCATCGGAGTAGA.............................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........CTCCAAAGCGACTGAACAATGCAGAA....................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................ACTGAACAATGCAGAAAGACAGTGGCCCAT......................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................GACTGAACAATGCAGAAAGACAGTGGCCCATT........................................................................................................................................................................................................ | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......GTCTCCAAAGCGACTGAACAATGCAGAA....................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................TTGAACTAGCGGCCTGGGACATGGA............................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................GACTGAACAATGCAGAAAGACA.................................................................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .....TGGTCTCCAAAGCGACTGAACAATGCAGAA....................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................ACATGATCCTTGAACTAGCGGCCTGGG.................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................TGTGCATCGGAGTAGAATCACTGGGA.................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............AAAGCGACTGAACAATGCAGAAAGACAGT................................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............CAAAGCGACTGAACAATGCAGAAAGACAG................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................TGTGCATCGGAGTAGAATCACTGGG..................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................TGAACAATGCAGAAAGACAGTGGCCCATT........................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........TCCAAAGCGACTGAACAATGCAGAAAa..................................................................................................................................................................................................................... | 27 | a | 1.00 | 9.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................CCTGTGCATCGGAGTAGA.............................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TAAAACCAGAGCACATGACGGGAACCTCC.................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................TGTGACATGATCCTTGAACTAGCGGCttt...................................................................... | 29 | ttt | 1.00 | 3.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................TGTGCATCGGAGTAGAATCACTGGGtgc.................................................................................................................................................................. | 28 | tgc | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................TGCAGAAAGACAGTGGCCCATTGatgt................................................................................................................................................................................................... | 27 | atgt | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................GGTTGTGACATGATCCTTGAACTAGCGcc......................................................................... | 29 | cc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........TCCAAAGCGACTGAACAATGCAGAAAGt.................................................................................................................................................................................................................... | 28 | t | 1.00 | 11.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................CTTGGCACTGCCCACCAGGCAGCGTAGG.................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .........................................................................................TCTAAAACCAGAGCACATGACGGGAACCT.................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TAAAACCAGAGCACATGACGGGAACCT.................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................TGAACAATGCAGAAAGACAGTGGCCC........................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................TGAACAATGCAGAAAGACAGTG............................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........TCCAAAGCGACTGAACAATGCAGAAAGACt.................................................................................................................................................................................................................. | 30 | t | 1.00 | 31.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................TCGGAGTAGAATCACTGGGAGC.................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...............................................................................................................................................GCGTAGGTTGTGACATGATCCTTGAACTA.............................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................GACTGAACAATGCAGAAAGAC................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............AAAGCGACTGAACAATGCAGAAAGACA.................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................ACTGAACAATGCAGAAAGACAGTGGCCC........................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TGGTGTGGTCTCCAAAGCGACTGAACAATGCAGAAAGACAGTGGCCCATTGTAAGTGCCCTGTGCATCGGAGTAGAATCACTGGGAGCCTCTAAAACCAGAGCACATGACGGGAACCTCCAGCTTGGCACTGCCCACCAGGCAGCGTAGGTTGTGACATGATCCTTGAACTAGCGGCCTGGGACATGGACTTGAATCCAGTTCTGCCACTGGCTAGTTCTTTCACCGAGCCTGCCACCTGGCCTATCTTT ................................................................................................((((.((.......((((...((((((((.((.(((((.....))))).)))))))).)).....))))..........))))))..................................................................... ..............................................................................................95......................................................................................183................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|