| Gene: Gdi2 | ID: uc007piu.1_intron_4_0_chr13_3555759_f | SPECIES: mm9 |
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(6) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(23) TESTES |
| GATGTTATAGACTTTACTGGCCATTCTCTTGCACTGTACAGAACAGATGAGTAAGTAGGCTAATGGCTCTCATCACCTAGCTGTGCAGAGGCTGTGAGCTATTGTCTAGCAGTGCTAGGAGGTGTCTTCCTGCATGTGGCTTTAGGCAACTTTACAGTTCCTGTATTAGATCAGATATTTATTAGAGAGTATCAACAGCAGAAAAAAGGGTGAGGATTCCAGTCAGGAATGTTTGGTTTTCAGATCTGTGTTTTTCTTTAAACTTTGAACTCTGAGACTGTTAAGTGTGAAACTTAGGACTTGTATGTTGCTGTCTGGCCCTGGGAAAGAGGGTCTATTTGCAAATGAGTCTAAGACTGTTTTAATTAGGGGATAGTCCTTTGAGATTACTGCAGGAAAAAGAGTTTAAAATCAATAAGAAGTAGTGTTTTTCTAATGTTCATTTGCTTTTTTTTTTTCCCAGCTACTTAGATCAGCCGTGTTGTGAAACCATTAATAGAATTAAACTTTACA .............................................................................................................................................................................................................................................................................................................................................................................(((((((.....))))))).....(((..((((((((((....((((.(((((((((.......)))))..)))).)))).....))))))))))))).................................................. ...........................................................................................................................................................................................................................................................................................................................................................................364................................................................................................463................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR037902(GSM510438) testes_rep3. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT4() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................................................GAGGATTCCAGTCAGGAATGTTTGGTTTTCAGATCTGTGTTTTTCTTTAAAC.......................................................................................................................................................................................................................................................... | 52 | 1 | 28.00 | 28.00 | 28.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................TTCTCTTGCACTGTACAGAACAGATGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 5.00 | 5.00 | - | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................CTTGCACTGTACAGAACAGATGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 23 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................CTGTACAGAACAGATGAGTAAGTAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGATCAGCCGTGTTGTGAAACCATT................... | 27 | 2 | 1.50 | 1.50 | - | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| .....................CATTCTCTTGCACTGTACAGAACAGATGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................TGTGTTTTTCTTTAAACTTTGAACT.................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCGTGTTGTGAAACCATTAATA............... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................GGCCATTCTCTTGCACTGTACAGAACAGATGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTAGATCAGCCGTGTTGT............................ | 20 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .....................CATTCTCTTGCACTGTACAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................AACTTAGGACTTGTATGTTGCTGT....................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................TCTTGCACTGTACAGAACAGATcac.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 25 | cac | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................CTCTTGCACTGTACAGAACAGATGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................CTTGCACTGTACAGAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......ATAGACTTTACTGGCCATTCTCTTGCACTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................CTTGCACTGTACAGAACAGATGActtt........................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | cttt | 1.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................GATTCCAGTCAGGAtttg......................................................................................................................................................................................................................................................................................... | 18 | tttg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATCAGCCGTGTTGTGAAACC...................... | 23 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................TCTGAGACTGTTAAGTGTGAAACTTAGGACT.................................................................................................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTTTTTTTTCCCgac................................................. | 18 | gac | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ......................ATTCTCTTGCACTGTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 16 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTAGATCAGCCGTGTTGTGAAACC...................... | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCAGCCGTGTTGTGA.......................... | 18 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTAGATCAGCCGTGTTGTGAAAC....................... | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................TGTACAGAACAGATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 15 | 13 | 0.08 | 0.08 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.08 |
| GATGTTATAGACTTTACTGGCCATTCTCTTGCACTGTACAGAACAGATGAGTAAGTAGGCTAATGGCTCTCATCACCTAGCTGTGCAGAGGCTGTGAGCTATTGTCTAGCAGTGCTAGGAGGTGTCTTCCTGCATGTGGCTTTAGGCAACTTTACAGTTCCTGTATTAGATCAGATATTTATTAGAGAGTATCAACAGCAGAAAAAAGGGTGAGGATTCCAGTCAGGAATGTTTGGTTTTCAGATCTGTGTTTTTCTTTAAACTTTGAACTCTGAGACTGTTAAGTGTGAAACTTAGGACTTGTATGTTGCTGTCTGGCCCTGGGAAAGAGGGTCTATTTGCAAATGAGTCTAAGACTGTTTTAATTAGGGGATAGTCCTTTGAGATTACTGCAGGAAAAAGAGTTTAAAATCAATAAGAAGTAGTGTTTTTCTAATGTTCATTTGCTTTTTTTTTTTCCCAGCTACTTAGATCAGCCGTGTTGTGAAACCATTAATAGAATTAAACTTTACA .............................................................................................................................................................................................................................................................................................................................................................................(((((((.....))))))).....(((..((((((((((....((((.(((((((((.......)))))..)))).)))).....))))))))))))).................................................. ...........................................................................................................................................................................................................................................................................................................................................................................364................................................................................................463................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR037902(GSM510438) testes_rep3. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT4() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................................................................................CAACAGCAGAAAAAAGcagt................................................................................................................................................................................................................................................................................................................. | 20 | cagt | 2.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTTTTTTTTTCCCActgt................................................... | 21 | ctgt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............................................................................................................................................................................................CAACAGCAGAAAAAAGcacg................................................................................................................................................................................................................................................................................................................. | 20 | cacg | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................CCTAGCTGTGCAGAGGCTGTGAGCTA............................................................................................................................................................................................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................CAACAGCAGAAAAAAGgggg................................................................................................................................................................................................................................................................................................................. | 20 | gggg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................TTCTTTAAACTTTGAtgtg..................................................................................................................................................................................................................................................... | 19 | tgtg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................CAACAGCAGAAAAAAGcaa................................................................................................................................................................................................................................................................................................................. | 19 | caa | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................CAACAGCAGAAAAAcagt................................................................................................................................................................................................................................................................................................................... | 18 | cagt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................................................................................................................................................................................CAACAGCAGAAAAAcatg................................................................................................................................................................................................................................................................................................................... | 18 | catg | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |