| Gene: Gtl2 | ID: uc007par.1_intron_4_0_chr12_110784753_f.3p | SPECIES: mm9 |
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(5) OTHER.mut |
(1) OVARY |
(1) PIWI.mut |
(13) TESTES |
| CCACCCCCAGGGCCTTGCCCCCCTCTCTGCCTCCCTCCCCATTCATGGCTGAGTACGGGCTACTTGCCCCCCCCCCCCGCCTCCCCAAACTCACCTCAGTTGCCAACAGCCTCCTGGTGCCTGTTGGACCATCCCTTGCTGGTTCTTCATTTCCTGTGGGCCTAGTTTCCAGGGGCTGAGTGACCAGGGTCTTAAAACAGGTTTAAGGCTTGGCTTGCTGGCCCTGGAGATCCCGTCGCCGTCTTCGTCG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................CTGTTGGACCATCCCTTGC............................................................................................................... | 19 | 1 | 3.00 | 3.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TTCTTCATTTCCTGTGGG.......................................................................................... | 18 | 3 | 3.00 | 3.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................GTTTCCAGGGGCTGAGTGA................................................................... | 19 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................AGGGGCTGAGTGACCAGGG............................................................. | 19 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................CTCCTGGTGCCTGTTGGACC........................................................................................................................ | 20 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................GTTGGACCATCCCTTGC............................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................CTGAGTACGGGCTACTTGCCCCCCCC................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................AGGGGCTGAGTGACCAGGc............................................................. | 19 | c | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................TGCCTGTTGGACCATCCCT.................................................................................................................. | 19 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................GGCCTAGTTTCCAGGGGCTGAGTGA................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TTTCCAGGGGCTGAGTGACCAGGG............................................................. | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................GGGGCTGAGTGACCAGGGTCTTAA....................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................TTCCTGTGGGCCTAGTTTCCAGGGGCTGA....................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................TGGGCCTAGTTTCCAGa............................................................................. | 17 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................CAGCCTCCTGGTGCCTGTTGGACCATCCCTT................................................................................................................. | 31 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................CTGGTTCTTCATTTCCTGTGGG.......................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................TCTTAAAACAGGTTTAAGGCTTGGCTTGa................................ | 29 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................GCTGAGTACGGGCTACTTGC....................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...................................................................................................................................................................AGTTTCCAGGGGCTGAG...................................................................... | 17 | 5 | 0.20 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CCACCCCCAGGGCCTTGCCCCCCTCTCTGCCTCCCTCCCCATTCATGGCTGAGTACGGGCTACTTGCCCCCCCCCCCCGCCTCCCCAAACTCACCTCAGTTGCCAACAGCCTCCTGGTGCCTGTTGGACCATCCCTTGCTGGTTCTTCATTTCCTGTGGGCCTAGTTTCCAGGGGCTGAGTGACCAGGGTCTTAAAACAGGTTTAAGGCTTGGCTTGCTGGCCCTGGAGATCCCGTCGCCGTCTTCGTCG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................GCCCCCCCCCCCCGCCccgg......................................................................................................................................................................... | 20 | ccgg | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - |
| .................................................................................................................................................TTCATTTCCTGTGGGCCTAGTTTCCA............................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................CTTCATTTCCTGTGGGCCTAGTTTCCA............................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................................................................................................................................TGCTGGTTCTTCATTTCCTGTGGGCCTA...................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................................................................................................................................GCTGGTTCTTCATgaaa.................................................................................................... | 17 | gaaa | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................CCCCCCCCCGCCTCagc....................................................................................................................................................................... | 17 | agc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........................................................................................................................................GCTGGTTCTTCATTTCCTGTGGGCCTA...................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |