| Gene: Degs2 | ID: uc007pab.1_intron_1_0_chr12_109930847_r.5p | SPECIES: mm9 |
|
|
(8) OTHER.mut |
(2) PIWI.ip |
(20) TESTES |
| GTGGGTCTACAGCGACCAGCCGCACACCCAGAGGCGCAAGGAGATGCTCGGTGAGCGCGCGCGAATCTAGCTGGGACACAGTAGCCACAATGGGGTGAATAGGATATGGGCGGGGGACAGTGCGCACGGGGGTCAGGGGTGGTGTGGTGGTGGGCCAGCGCGCCCCGCGGGTTCTTCGCCTGCAGCTAGTATGCGCCTGCTGTGTGCAGACCCTGCTCAGGAAGCAGGATATGCCTTTTTCCTTGGGGAC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR037900(GSM510436) testes_rep1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................GTGGTGTGGTGGTGGcgcg............................................................................................. | 19 | cgcg | 149.00 | 0.00 | 73.00 | 24.00 | 28.00 | 2.00 | 7.00 | 4.00 | 9.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................GTGGTGTGGTGGTGGcgc.............................................................................................. | 18 | cgc | 142.00 | 0.00 | 15.00 | 2.00 | 28.00 | 62.00 | 10.00 | 10.00 | 5.00 | 10.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................GTGGTGTGGTGGTGGcg............................................................................................... | 17 | cg | 134.00 | 0.00 | 29.00 | 28.00 | 30.00 | 8.00 | 19.00 | 7.00 | 12.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................GGTGGTGTGGTGGTGGcg............................................................................................... | 18 | cg | 109.00 | 0.00 | 50.00 | 22.00 | 11.00 | 4.00 | 14.00 | 4.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................GGTGGTGTGGTGGTGGcgc.............................................................................................. | 19 | cgc | 63.00 | 0.00 | 30.00 | 2.00 | 4.00 | 18.00 | 3.00 | 2.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................GGTGGTGTGGTGGTGGcgcg............................................................................................. | 20 | cgcg | 43.00 | 0.00 | 2.00 | 21.00 | 8.00 | - | 3.00 | 8.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................GGGGTGGTGTGGTGGTGGc................................................................................................ | 19 | c | 14.50 | 6.25 | 4.75 | 1.50 | 2.75 | 0.75 | 1.75 | 1.00 | 1.50 | 0.25 | - | - | - | - | - | - | - | - | - | - | 0.25 | - |
| .......................................................................................................................................GGGGTGGTGTGGTGGTGGcg............................................................................................... | 20 | cg | 12.75 | 6.25 | 2.25 | 3.25 | 2.50 | 0.50 | 2.50 | 1.75 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................GGGTGGTGTGGTGGTGG................................................................................................. | 17 | 7 | 9.86 | 9.86 | 0.29 | 6.43 | 0.43 | - | 2.57 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................GGGTGGTGTGGTGGTGGcg............................................................................................... | 19 | cg | 9.14 | 9.86 | 1.43 | 3.43 | 1.29 | - | 2.29 | 0.14 | 0.43 | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 |
| .......................................................................................................................................GGGGTGGTGTGGTGGcggc................................................................................................ | 19 | cggc | 8.00 | 0.00 | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................GGGGTGGTGTGGTGGTGG................................................................................................. | 18 | 4 | 6.25 | 6.25 | - | 4.25 | 0.25 | - | 1.50 | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................GGGGTGGTGTGGTGGTGGcgcg............................................................................................. | 22 | cgcg | 4.25 | 6.25 | 1.00 | 0.75 | 1.50 | - | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................GGGGTGGTGTGGTGGTGGcgc.............................................................................................. | 21 | cgc | 3.50 | 6.25 | 1.25 | 0.25 | 0.50 | 0.50 | 0.75 | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - | - |
| ........................................................................................................................................GGGTGGTGTGGTGGTGGcgcg............................................................................................. | 21 | cgcg | 3.14 | 9.86 | 0.86 | 0.57 | 0.57 | - | 0.71 | 0.14 | 0.14 | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................GGGGTGGTGTGGTGGT................................................................................................... | 16 | 17 | 3.12 | 3.12 | 1.47 | 1.29 | 0.06 | - | 0.24 | 0.06 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................GGGTGGTGTGGTGGTGGcgc.............................................................................................. | 20 | cgc | 3.00 | 9.86 | 0.14 | - | 0.57 | 0.43 | 1.00 | 0.71 | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................GGGGTGGTGTGGTGGTG.................................................................................................. | 17 | 11 | 2.73 | 2.73 | 0.27 | 0.73 | 0.82 | - | 0.64 | 0.18 | 0.09 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................GGGTGGTGTGGTGGTG.................................................................................................. | 16 | 17 | 2.53 | 2.53 | 0.76 | 1.00 | 0.24 | - | 0.53 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................ATATGGGCGGGGGAactt................................................................................................................................. | 18 | actt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................................................................ATATGGGCGGGGGAactg................................................................................................................................. | 18 | actg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................................................................................................ATATGGGCGGGGGtgaa.................................................................................................................................. | 17 | tgaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................GATATGGGCGGGGGtgaa.................................................................................................................................. | 18 | tgaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ........................................................................................................................................GGGTGGTGTGGTGGTGGca............................................................................................... | 19 | ca | 0.29 | 9.86 | - | - | - | - | - | - | - | - | - | 0.29 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................GGGTGGTGTGGTGGTGGcgtg............................................................................................. | 21 | cgtg | 0.14 | 9.86 | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GTGGGTCTACAGCGACCAGCCGCACACCCAGAGGCGCAAGGAGATGCTCGGTGAGCGCGCGCGAATCTAGCTGGGACACAGTAGCCACAATGGGGTGAATAGGATATGGGCGGGGGACAGTGCGCACGGGGGTCAGGGGTGGTGTGGTGGTGGGCCAGCGCGCCCCGCGGGTTCTTCGCCTGCAGCTAGTATGCGCCTGCTGTGTGCAGACCCTGCTCAGGAAGCAGGATATGCCTTTTTCCTTGGGGAC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR037900(GSM510436) testes_rep1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................................CGCGGGTTCTTCGCCTGCAGCTAGTA........................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................................................................................GGGCGGGGGACAGTtct................................................................................................................................. | 17 | tct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................GCTGGGACACAGTAGCCACAATGGGGTGA........................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ............................................................GCGAATCTAGCTGGGACACAGTAGCCAC.................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...............................................................................................................................................................................................................AGACCCTGCTCAGGAAGCAGGATATGCCTT............. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |