| Gene: Lgmn | ID: uc007oue.1_intron_8_0_chr12_103641713_r.3p | SPECIES: mm9 |
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(5) OTHER.mut |
(1) OVARY |
(1) PIWI.ip |
(14) TESTES |
| CTATATAGATCAGGCTGGTCTCACTCAAAGAGATCCACCTGCCTTTGTCTCTCAAATACCGGGATTAAAGGCGTGAGCTGCCTCGCCCTGCTCAGATTTCTTAACTTTTTGATGAAGGCATTTCTTCAGAGATGTGGACAGGGGAACAGGAGTGGGAAGCTGTGGCTCCCTGGCTCACCCGCTCTGTGCTCTCTTGACAGTGGCCCCCGAGATCATGTCTTCATTTACTTCACCGACCACGGAGCCACCG ......................................................................................................................................((..(((((((.((((((((((.(((((.((...)))))))..)))))))).)).))))))).))................................................... .................................................................................................................................130...................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR037899(GSM510435) ovary_rep4. (ovary) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) |
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| ......................................................................................................................................TGGACAGGGGAACAGGAGTGGGA............................................................................................. | 23 | 1 | 4.00 | 4.00 | 2.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TCACCCGCTCTGTGCTCTCTTG...................................................... | 22 | 1 | 3.00 | 3.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ......................................................................................................................................TGGACAGGGGAACAGGAGTGGGAA............................................................................................ | 24 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...........................................................................................................TTTGATGAAGGCATTgtat............................................................................................................................ | 19 | gtat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....TAGATCAGGCTGGTCTCgatt................................................................................................................................................................................................................................ | 21 | gatt | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................TGGACAGGGGAACAGGAGTGG............................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ............................................................GGGATTAAAGGCGTGAGCTGCCggtc.................................................................................................................................................................... | 26 | ggtc | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................TGGACAGGGGAACAGGAGTGGGAt............................................................................................ | 24 | t | 1.00 | 4.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................CCCCCGAGATCATGTCTTC............................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................................................TTAAAGGCGTGAGCTGCCgtag.................................................................................................................................................................... | 22 | gtag | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................GGGATTAAAGGCGTGAGCTGCCggaa.................................................................................................................................................................... | 26 | ggaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................................................................................................TGGACAGGGGAACAGGAGTGGGAAa........................................................................................... | 25 | a | 1.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................CGGGATTAAAGGCGTGAGtggg......................................................................................................................................................................... | 22 | tggg | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................ACCGGGATTAAAGGCGTG............................................................................................................................................................................... | 18 | 16 | 0.06 | 0.06 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.06 |
| CTATATAGATCAGGCTGGTCTCACTCAAAGAGATCCACCTGCCTTTGTCTCTCAAATACCGGGATTAAAGGCGTGAGCTGCCTCGCCCTGCTCAGATTTCTTAACTTTTTGATGAAGGCATTTCTTCAGAGATGTGGACAGGGGAACAGGAGTGGGAAGCTGTGGCTCCCTGGCTCACCCGCTCTGTGCTCTCTTGACAGTGGCCCCCGAGATCATGTCTTCATTTACTTCACCGACCACGGAGCCACCG ......................................................................................................................................((..(((((((.((((((((((.(((((.((...)))))))..)))))))).)).))))))).))................................................... .................................................................................................................................130...................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR037899(GSM510435) ovary_rep4. (ovary) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) |
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| ......................AAAGAGATCCACCTGCttct................................................................................................................................................................................................................ | 20 | ttct | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |