| Gene: Smek1 | ID: uc007oti.1_intron_5_0_chr12_102288029_r.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(1) PIWI.ip |
(6) TESTES |
| TCTCACTGCTCCCTTACTAGCAAATACAACAGAAGACAAGCCTAGTAAAGGTAAGATGCTAGAGGTTCATAGTTTTCTTGAGTTATGAAGCTCAAAGCTTAGCTGTGTAACTAAATTTAAGACATTAGGGCTAGAGAAGTAACTCAAGGATTATAAGAGCACTGGTTGCTCTTCCAGAAGACCCTGGTTTGATTTCAAGAACCCATACAGCAACTAACAACAGTCTGAACTCCAGTCCTGGGTCATCTGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................GGCTAGAGAAGTAACTCAAGGATTATAAGAGCACTGGTTGCTCTTCCAGAAG...................................................................... | 52 | 1 | 27.00 | 27.00 | 27.00 | - | - | - | - | - |
| ....................CAAATACAACAGAAGACAAGCCTAGT............................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - |
| ........................TACAACAGAAGACAAGCCTAGTAAAGt....................................................................................................................................................................................................... | 27 | t | 1.00 | 0.00 | - | - | - | - | 1.00 | - |
| .......................................................................................................................................GAAGTAACTCAAGGA.................................................................................................... | 15 | 6 | 0.17 | 0.17 | - | - | - | - | - | 0.17 |
| TCTCACTGCTCCCTTACTAGCAAATACAACAGAAGACAAGCCTAGTAAAGGTAAGATGCTAGAGGTTCATAGTTTTCTTGAGTTATGAAGCTCAAAGCTTAGCTGTGTAACTAAATTTAAGACATTAGGGCTAGAGAAGTAACTCAAGGATTATAAGAGCACTGGTTGCTCTTCCAGAAGACCCTGGTTTGATTTCAAGAACCCATACAGCAACTAACAACAGTCTGAACTCCAGTCCTGGGTCATCTGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................................................................TTCCAGAAGACCCTGtaac................................................................ | 19 | taac | 1.00 | 0.00 | - | 1.00 | - | - | - | - |
| ........................................................................................................................................................................................................................CAGTCTGAACTCCAgttg................ | 18 | gttg | 1.00 | 0.00 | - | - | 1.00 | - | - | - |