| Gene: Smek1 | ID: uc007oti.1_intron_4_0_chr12_102282870_r.3p | SPECIES: mm9 |
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(2) PIWI.ip |
(7) TESTES |
| ACGCCCTGGCTATTCTAGAGCTTCCTAGTGTTGGATTACAAGCATAAATTTTACAACCTACTGACATGACACTGTTTTGAATGCATTTTCTTACTCTTAAGGTTCATATTCTGCATACATGTGATCATGGATGTCTGTTAAATAGATTCTGTTTGTTGATTCTGAGATGTAGTTTGAACAGCAATACCTCTGTGTTTCAGGTGCCCTCCGTTTTAAGAGAAAAATCATTGGATTAAAAGATGAATTTTAT .....................................................................................................(((((....((((((.((((....)))).............((((.((........)).))))..))))))..)))))...(((((....)))))...................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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| ......................................................................................................................ATGTGATCATGGATGTCTGTTAAATAGATTCTGTTTGTTGATTCTGAGATGT................................................................................ | 52 | 1 | 196.00 | 196.00 | 196.00 | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................TAAGAGAAAAATCATTGGATTAAAAGAT......... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 |
| ..................................................................................................................................................................................................................................ATTGGATTAAAAGAgtta...... | 18 | gtta | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - |
| ................................................................................................................................................................................................................CGTTTTAAGAGAAAAATCATTGGATTAAAAGt.......... | 32 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - |
| .........................................................................................................................................TTAAATAGATTCTGTacct.............................................................................................. | 19 | acct | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - |
| .......................................................................................................................................................................................................................AGAGAAAAATCATTGGATTAAAAGATGt....... | 28 | t | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - |
| ...................................................................................................................................................................................................................TTTAAGAGAAAAATCATTGGATTAAAAGA.......... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - |
| ACGCCCTGGCTATTCTAGAGCTTCCTAGTGTTGGATTACAAGCATAAATTTTACAACCTACTGACATGACACTGTTTTGAATGCATTTTCTTACTCTTAAGGTTCATATTCTGCATACATGTGATCATGGATGTCTGTTAAATAGATTCTGTTTGTTGATTCTGAGATGTAGTTTGAACAGCAATACCTCTGTGTTTCAGGTGCCCTCCGTTTTAAGAGAAAAATCATTGGATTAAAAGATGAATTTTAT .....................................................................................................(((((....((((((.((((....)))).............((((.((........)).))))..))))))..)))))...(((((....)))))...................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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