| Gene: Gtf2a1 | ID: uc007okr.1_intron_5_0_chr12_92811074_r.3p | SPECIES: mm9 |
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(1) OTHER.mut |
(1) PIWI.ip |
(7) TESTES |
| AAAATAAATATATTCGAGCTGTTGATTTCCATAGGAAAAAAATTTAGAAAGTCTAAAATAGCATATAGTTTGAAAGTATTTTAAAGTAGAAAATGCAACAAAAGCATGAAAAAGGTAAAAAAGGTTTTGGCATTTATAACATTCCTGCAGCTCTGAAGTATTCTTGTTGTAAATGGGCCTTTTTTTTTCTATTTTTGTAGCTACAGCACCACAAGTTATTGTTCCTGATTCTAAGTTGCTACAACATATG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................ATTTTAAAGTAGAAAATGCAACAAAAGCATGAAAAAGGTAAAAAAGGTTTTG......................................................................................................................... | 52 | 1 | 58.00 | 58.00 | 58.00 | - | - | - | - | - | - |
| ...................TGTTGATTTCCATAGGAAAAAAATTTAGAAAGTCTAAAATAGCATATAGTTT................................................................................................................................................................................... | 52 | 1 | 15.00 | 15.00 | 15.00 | - | - | - | - | - | - |
| ..........................................................................................................TGAAAAAGGTAAAAAAGGTTTTGGCATT.................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - |
| ..............................................GAAAGTCTAAAATAGaaat......................................................................................................................................................................................... | 19 | aaat | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 |
| ........................................................................................................................................TAACATTCCTGCAGCTCTGAAGTATT........................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - |
| ........................................................................................................................................................................................................................TATTGTTCCTGATTCTAAGTTGCTACA....... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - |
| ..............................................................................................................................................................................................................................TCCTGATTCTAAGTTGCTACAACATAT. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - |
| AAAATAAATATATTCGAGCTGTTGATTTCCATAGGAAAAAAATTTAGAAAGTCTAAAATAGCATATAGTTTGAAAGTATTTTAAAGTAGAAAATGCAACAAAAGCATGAAAAAGGTAAAAAAGGTTTTGGCATTTATAACATTCCTGCAGCTCTGAAGTATTCTTGTTGTAAATGGGCCTTTTTTTTTCTATTTTTGTAGCTACAGCACCACAAGTTATTGTTCCTGATTCTAAGTTGCTACAACATATG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ....AATATATTCGAGCag....................................................................................................................................................................................................................................... | 15 | ag | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - |