| Gene: Pomt2 | ID: uc007oij.1_intron_4_0_chr12_88452534_r | SPECIES: mm9 |
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(4) OTHER.mut |
(2) PIWI.ip |
(1) PIWI.mut |
(11) TESTES |
| AGGACAATGAGTTCACATCCAAGCCCTGGCACTGGCCTATCAATTATCAGGTAGGGCCCAATTCTTGAGCTCTTCCAGGACATAGCAACAAGAAAGAGACTGTGGGGCTGGAGTATGTATGCAAGGGGAAGCCTCACCTAGGAGGACTCACCAGGAAAGACACGCTGTTTTCTACCTGCTTTTGACTGCTACTTCCTAGAGAATTCTTGTAGTGTTCAGTCTGAGCCTCCTGTCGGGGCTGCTCATCTATGAAGGATGAGTATTGTGTGTAATCGTCCTTCCCCTTGAATGGATGGTTGGGGATAAGCTGAGTCTTGGATCAGTGGGATGTCCTTTGCTCCACAGGGCCTGCGCTTCTCAGGGGCCAATGACACGGACTTCCGAGTCTATCTGCT ..........................................................................................................................................................................................................................................................(((((((((.(((.....))).)))))))))........((((..((..((((((.(((((........)))))....))))))..))))))..................................................... .....................................................................................................................................................................................................................................................246................................................................................................345................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
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| .............................................................TTCTTGAGCTCTTCCAGGACATAGCAACAAGAAAGAGACTGTGGGGCTGGAG.......................................................................................................................................................................................................................................................................................... | 52 | 1 | 72.00 | 72.00 | 72.00 | - | - | - | - | - | - | - | - | - | - |
| .......TGAGTTCACATCCAAGCCCTGGCAC........................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......TGAGTTCACATCCAAGCCCTGGCAt........................................................................................................................................................................................................................................................................................................................................................................... | 25 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............CACATCCAAGCCCTGGCACTGGC....................................................................................................................................................................................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ....CAATGAGTTCACATCCAAGCCCTGG.............................................................................................................................................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................AGGGGCCAATGACACGGACTT............... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ......ATGAGTTCACATCCAAGCCCTGGCACTGGCC...................................................................................................................................................................................................................................................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....CAATGAGTTCACATCCAAGCCCTGGCA............................................................................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| AGGACAATGAGTTCACATCCAAGCCCTGGCACTGGCCTATCAATTATCAGGTAGGGCCCAATTCTTGAGCTCTTCCAGGACATAGCAACAAGAAAGAGACTGTGGGGCTGGAGTATGTATGCAAGGGGAAGCCTCACCTAGGAGGACTCACCAGGAAAGACACGCTGTTTTCTACCTGCTTTTGACTGCTACTTCCTAGAGAATTCTTGTAGTGTTCAGTCTGAGCCTCCTGTCGGGGCTGCTCATCTATGAAGGATGAGTATTGTGTGTAATCGTCCTTCCCCTTGAATGGATGGTTGGGGATAAGCTGAGTCTTGGATCAGTGGGATGTCCTTTGCTCCACAGGGCCTGCGCTTCTCAGGGGCCAATGACACGGACTTCCGAGTCTATCTGCT ..........................................................................................................................................................................................................................................................(((((((((.(((.....))).)))))))))........((((..((..((((((.(((((........)))))....))))))..))))))..................................................... .....................................................................................................................................................................................................................................................246................................................................................................345................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
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| ....................................................................................................................................................................................................................................................................................................GTTGGGGATAAGCTGAata.................................................................................... | 19 | ata | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......................................................................................................................................................................................................................................................................................................................TTGGATCAGTGGGAcagc................................................................... | 18 | cagc | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................TTGAGCTCTTCCAGat............................................................................................................................................................................................................................................................................................................................. | 16 | at | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..........................................................................................................................................................................................................TTGTAGTGTTCAGTctgc............................................................................................................................................................................... | 18 | ctgc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - |