(4)
OTHER.mut
(5)
PIWI.ip
(2)
PIWI.mut
(22)
TESTES

Sense strand
GCCTGCTGACAGTTGCCGTGGCCATTAGTGCTGAATGCCCTTTTTTCTTGTAATCCAAGACAAGCTGGGGGGAGGGGAAGAGGTCAGTATTGAGTGCCTGCAGCATCTGCTACTACATCTACACCATTCAGAACTTGTAACTAAAATATTTAAAGAGACTGATTTTGAATGAAAATTAAAGGGCAAATGTTCTCAAACAGGGCTCCGGGATCTGTGCTCCTTTTGACCCTCGAGGCTTTACAGCCTCCAT
......................................................................................(((.((((((...((((...)))))))).))..)))..(((((((((...((..((...........))..))...)))))))))...............................................................................
.....................................................................................86.............................................................................................181...................................................................
Size Perfect hit Total Norm Perfect Norm SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR037902(GSM510438)
testes_rep3. (testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR014235(GSM319959)
2 dpp total. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
..........................................................................................TGAGTGCCTGCAGCATCTGCTACTACATC................................................................................................................................... 29 1 6.00 6.00 - 6.00 - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................AAGAGACTGATTTTGAATGAAA............................................................................ 22 1 4.00 4.00 - - - - - - 4.00 - - - - - - - - - - - - - - -
......................................................................................................................................................TAAAGAGACTGATTTTGAATGAAAATT......................................................................... 27 1 3.00 3.00 1.00 - - 1.00 1.00 - - - - - - - - - - - - - - - - -
....................................................................................................................................................TTTAAAGAGACTGATTTTGAATGAAAATT......................................................................... 29 1 3.00 3.00 - - - 1.00 2.00 - - - - - - - - - - - - - - - - -
..................................................................................GTCAGTATTGAGTGCCTGCA.................................................................................................................................................... 20 1 2.00 2.00 - - - - - - - - - - 2.00 - - - - - - - - - - -
.....................................................................................................................................................TTAAAGAGACTGATTTTGAATGAAAATT......................................................................... 28 1 2.00 2.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................TTAAAGAGACTGATTTTGAATGAAAAT.......................................................................... 27 1 2.00 2.00 - - - - - - - - - - - 2.00 - - - - - - - - - -
...................................................................................................................................................ATTTAAAGAGACTGATTTTGAATGA.............................................................................. 25 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - -
.........................................................................................TTGAGTGCCTGCAGCATCTGCTACTACATC................................................................................................................................... 30 1 2.00 2.00 - - - - - 2.00 - - - - - - - - - - - - - - - -
...............................................................................................................................................................................TTAAAGGGCAAATGTTCTCAAACAGGGC............................................... 28 1 2.00 2.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - -
.....................................................................................................................TCTACACCATTCAGAACTTGTAACTAAAAT....................................................................................................... 30 1 2.00 2.00 - - - - - - - 1.00 - - - - - - - - 1.00 - - - - -
..................................................................................................................................................TATTTAAAGAGACTGATTTTGAATGAAAATT......................................................................... 31 1 2.00 2.00 - - 1.00 1.00 - - - - - - - - - - - - - - - - - -
......TGACAGTTGCCGTGGCCATTAGTGCTGA........................................................................................................................................................................................................................ 28 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - -
..............................................................................................................................................................................................................................TTGACCCTCGAGtgca............ 16 tgca 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - -
........................................................................................................................................................AAGAGACTGATTTTGAATGAAAATTAAAGGGC.................................................................. 32 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - -
.................................................GTAATCCAAGACAAGCTGGGGGGAGG............................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - -
..................................................................................................................................................TATTTAAAGAGACTGATTTTGAATGAAA............................................................................ 28 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - -
............................................................................GAAGAGGTCAGTATTGAGTG.......................................................................................................................................................... 20 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - -
.........................................................................................................................................................................TGAAAATTAAAGGGCAAATGTTCTCAAAC.................................................... 29 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - -
.......................................................................................................................................TGTAACTAAAATATTTAAAGAGACTGA........................................................................................ 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - -
..........................................................................................TGAGTGCCTGCAGCATCTGCTACTACA..................................................................................................................................... 27 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - -
...................................TGCCCTTTTTTCTTGTAATCCAAGACAAGC......................................................................................................................................................................................... 30 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................ACTGATTTTGAATGAAAATTAAAGGGC.................................................................. 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - -
..........................................................................................TGAGTGCCTGCAGCATCTGCTACTACATa................................................................................................................................... 29 a 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................TAAAGAGACTGATTTTGAA................................................................................. 19 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - -
.........................................................................................TTGAGTGCCTGCAGCATCTGCTACTACAT.................................................................................................................................... 29 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - -
........................................TTTTTTCTTGTAATCCAAGACAAGCTGG...................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - -
..............................................................................AGAGGTCAGTATTGAGTGCCTGCAGC.................................................................................................................................................. 26 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - -
..........................................................................................................................................AACTAAAATATTTAAAGAGACTGATTT..................................................................................... 27 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - -
..........................................................................................................................................................GAGACTGATTTTGAATGAAAATTAAAGGGC.................................................................. 30 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - -
..............................................................................................................................TTCAGAACTTGTAACTAAAATA...................................................................................................... 22 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - -
........................................TTTTTTCTTGTAATCCAAGACAAGCTGGGGt................................................................................................................................................................................... 31 t 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - -
............................................................................................................GCTACTACATCTACACCATTCAGAACTTGT................................................................................................................ 30 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - -
....................................................................................................................................................TTTAAAGAGACTGATTTTGA.................................................................................. 20 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - -
.................................................................................................................TACATCTACACCATTCAGAACTTGTAACT............................................................................................................ 29 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 -
.......................................................................................................................................................AAAGAGACTGATTTTGAATGAAAATTAAAGG.................................................................... 31 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - -
.......................................................................................................................TACACCATTCAGAACTTGTAACTAAAAT....................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - -
...............................................................GCTGGGGGGAGGGGAAGAGt....................................................................................................................................................................... 20 t 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................TATTTAAAGAGACTGATTTTGAATGAA............................................................................. 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................TATTTAAAGAGACTGATTTTGA.................................................................................. 22 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - -
..............................................................................................................TACTACATCTACACCATTCAG....................................................................................................................... 21 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - -
...........................................................................................................TGCTACTACATCTACACCATTCAGAACTT.................................................................................................................. 29 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - -
..............................................................................................................TACTACATCTACACCATTCAGAACTTGT................................................................................................................ 28 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - -
..................................................................................................................................................TATTTAAAGAGACTGATTTTGAATG............................................................................... 25 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................TTAAAGAGACTGATTTTGAATGAA............................................................................. 24 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - -
..........................................................................................TGAGTGCCTGCAGCATCTGCTACTACAT.................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00
................................................................................................................................CAGAACTTGTAACTAAAA........................................................................................................ 18 2 0.50 0.50 - - - - - - - - - - - - 0.50 - - - - - - - - -

Antisense strand
GCCTGCTGACAGTTGCCGTGGCCATTAGTGCTGAATGCCCTTTTTTCTTGTAATCCAAGACAAGCTGGGGGGAGGGGAAGAGGTCAGTATTGAGTGCCTGCAGCATCTGCTACTACATCTACACCATTCAGAACTTGTAACTAAAATATTTAAAGAGACTGATTTTGAATGAAAATTAAAGGGCAAATGTTCTCAAACAGGGCTCCGGGATCTGTGCTCCTTTTGACCCTCGAGGCTTTACAGCCTCCAT
......................................................................................(((.((((((...((((...)))))))).))..)))..(((((((((...((..((...........))..))...)))))))))...............................................................................
.....................................................................................86.............................................................................................181...................................................................
Size Perfect hit Total Norm Perfect Norm SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR037902(GSM510438)
testes_rep3. (testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR014235(GSM319959)
2 dpp total. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)