| Gene: Aldh6a1 | ID: uc007ofk.1_intron_6_0_chr12_85780666_r.3p | SPECIES: mm9 |
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(3) PIWI.ip |
(7) TESTES |
| AAGCACAAATGATATTTCAGAATATATATACATCTTACTATCTTTTTTACCCCCTCAGAGAATCTGAGGAACATGGAAGGACAAATCGCTGTCAGTGGCATGACCCACCCCTGATTGTCAGGATCGAATGGAGTGTGACAAAGCTAAGTAGTATTTAGCATGGAAAGGTGGTGACCTCACTGATGTCTTTTCTCTTCCAGAGGTGGTTGAGCATGCCTGTAGTGTGACATCCCTCATGCTGGGAGAGACC ....................................................((((((.....))))))..((((....((((......)))).....))))...(((((((..((((((...((.....))...)))))).(((((((...)))))))......))).))))............................................................................. ..................................................51........................................................................................................................173........................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................CAGAGAATCTGAGGAACATGGAAGGACAAATCGCTGTCAGTGGCATGACCCA............................................................................................................................................... | 52 | 1 | 22.00 | 22.00 | 22.00 | - | - | - | - | - | - |
| ..............................................................TCTGAGGAACATGGAAGGACAAATCGCT................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - |
| ............................................................................................................................................................AGCATGGAAAGGTGGaac............................................................................ | 18 | aac | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - |
| ..............................................................................................................................AATGGAGTGTGACAAAGCTAAGTAGTAT................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - |
| AAGCACAAATGATATTTCAGAATATATATACATCTTACTATCTTTTTTACCCCCTCAGAGAATCTGAGGAACATGGAAGGACAAATCGCTGTCAGTGGCATGACCCACCCCTGATTGTCAGGATCGAATGGAGTGTGACAAAGCTAAGTAGTATTTAGCATGGAAAGGTGGTGACCTCACTGATGTCTTTTCTCTTCCAGAGGTGGTTGAGCATGCCTGTAGTGTGACATCCCTCATGCTGGGAGAGACC ....................................................((((((.....))))))..((((....((((......)))).....))))...(((((((..((((((...((.....))...)))))).(((((((...)))))))......))).))))............................................................................. ..................................................51........................................................................................................................173........................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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| .........................................................................................................................................................................ACCTCACTGATGTCtgta............................................................... | 18 | tgta | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 |
| ......................................................................................................ACCCACCCCTGATTGTCAGGATCGAA.......................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - |
| .....................................................................................................GACCCACCCCTGATTGTCAGGA............................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - |