| Gene: Psen1 | ID: uc007odo.1_intron_3_0_chr12_85053505_f.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(13) TESTES |
| CAAGCTAGCTTGGGGTTTCTTATTAGATTCTGTGTCAAAAACTAACCAACCAAATAAAAATATCCTTGGTTGACTGATGACCTGCAAAAGGCACCTTCTAAAAGACTCATTAAACCGCAGACCTCACAGTGAATTACAGTTTTAAGAGTGTGCTGTTTGACATATGCATTAACACTCTGGTGTTTTGTTTCCCTCTGTAGAATCTACACCCCATTCACAGAAGACACTGAGACTGTAGGCCAAAGAGCCC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
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| .................................................CCAAATAAAAATATCCTTGGTTGACTGATGACCTGCAAAAGGCACCTTCTAA..................................................................................................................................................... | 52 | 1 | 28.00 | 28.00 | 28.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................TTCACAGAAGACACTGAGACTGTAGGCC......... | 28 | 1 | 6.00 | 6.00 | - | 1.00 | 1.00 | - | - | - | 2.00 | - | 1.00 | 1.00 | - | - | - |
| ......................................................................................................................................................................................................................TCACAGAAGACACTGAGACTGTAGGCC......... | 27 | 1 | 4.00 | 4.00 | - | 1.00 | 1.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | - |
| .................................................................................................................................................................................................................................ACTGAGACTGTAGGCCAAAGA.... | 21 | 1 | 3.00 | 3.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................TTCACAGAAGACACTGAGACTGTAGGC.......... | 27 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................GACACTGAGACTGTAGGCC......... | 19 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - |
| .....................................................................................................................................................................................................................................AGACTGTAGGCCAAAGAGC.. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................CAGAAGACACTGAGACTGTAGGCCAAAGA.... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..........................................................................................................................................................................................................................AGAAGACACTGAGACTGTAGGCCAA....... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................AGACACTGAGACTGTAGGCCAAAGAG... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .............................................................................................................................................................................................................................AGACACTGAGACTGTAGGCC......... | 20 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................TCACAGAAGACACTGAGACTGTAGGCCAA....... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................CACAGAAGACACTGAGACTGTAGGCCAA....... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................CTGAGACTGTAGGCCAAAGAG... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................CCCATTCACAGAAGACACTGAGACTGTAGG........... | 30 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................AAGACACTGAGACTGTAGGCCAAAGAGCC. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................AGAAGACACTGAGACTGTAGGCCAAAGA.... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........................................................................................................................................................................................................................CAGAAGACACTGAGACTGTAG............ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..............................................................................................CTTCTAAAAGACTCcagt.......................................................................................................................................... | 18 | cagt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...................................................................................................................................................................................................................CATTCACAGAAGACACTGAGACTGTAGG........... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................CTGAGACTGTAGGCCAAAG..... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| CAAGCTAGCTTGGGGTTTCTTATTAGATTCTGTGTCAAAAACTAACCAACCAAATAAAAATATCCTTGGTTGACTGATGACCTGCAAAAGGCACCTTCTAAAAGACTCATTAAACCGCAGACCTCACAGTGAATTACAGTTTTAAGAGTGTGCTGTTTGACATATGCATTAACACTCTGGTGTTTTGTTTCCCTCTGTAGAATCTACACCCCATTCACAGAAGACACTGAGACTGTAGGCCAAAGAGCCC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
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