| Gene: Sfrs5 | ID: uc007obn.1_intron_4_0_chr12_82048853_f.5p | SPECIES: mm9 |
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(5) OTHER.mut |
(6) PIWI.ip |
(2) PIWI.mut |
(1) TDRD1.ip |
(22) TESTES |
| CAGAAAATCGACTTATAGTTGAGAATTTATCCTCAAGAGTCAGCTGGCAGGTTTGTTGAAATACAGTTTTGAGATATTTTTTAATGTGGCATTTAAAAGTGTTAATGGGTAGTTAATGTTTTATTAATATATATCTTATTAAATGCTTTATCTTAAATTAATTTAATTGAACTATAATTTTAAACTTTAGTTAAATGTAACTGGGGGATGTTTCAGATTTTAATATTAGTGATCAAATGTAAATGTTTTG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR014237(GSM319961) 10 dpp MILI-KO total. (mili testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
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| ..................................................GTTTGTTGAAATACAGTTTTGAGATATTTTTTAATGTGGCATTTAAAAGTGT.................................................................................................................................................... | 52 | 1 | 20.00 | 20.00 | 20.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................AGAATTTATCCTCAAGAGTCAGCTGGCA......................................................................................................................................................................................................... | 28 | 2 | 1.50 | 1.50 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - |
| .............................TCCTCAAGAGTCAGCTGGCAGccta.................................................................................................................................................................................................... | 25 | ccta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................TCCTCAAGAGTCAGCTGGCAGGTTTGT.................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................TCAAGAGTCAGCTGGCAG........................................................................................................................................................................................................ | 18 | 2 | 1.00 | 1.00 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - |
| ..................TTGAGAATTTATCCTCAAGAGTCAGCTGGCAG........................................................................................................................................................................................................ | 32 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................AATTTATCCTCAAGAGTCAGCTGGCAGc....................................................................................................................................................................................................... | 28 | c | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................AATGTGGCATTTAAAAGTGTTAATGGGTAGT......................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................AAAGTGTTAATGGGTtcag........................................................................................................................................ | 19 | tcag | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................AATTTATCCTCAAGAGTCAGCTGGCAGccta.................................................................................................................................................................................................... | 31 | ccta | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................AGAATTTATCCTCAAGAGTCAGCTGGC.......................................................................................................................................................................................................... | 27 | 2 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................AGAATTTATCCTCAAGAGTCAGCTGGt.......................................................................................................................................................................................................... | 27 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................AGTCAGCTGGCAGGTTTGTTGAA.............................................................................................................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................CCTCAAGAGTCAGCTGGCAGGTTTGTTGAAAT............................................................................................................................................................................................ | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................AACTGGGGGATGTcaga................................... | 17 | caga | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................CCTCAAGAGTCAGCTGGCAGGTTTGTTGAAA............................................................................................................................................................................................. | 31 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................AGAATTTATCCTCAAGAGTCAGCTG............................................................................................................................................................................................................ | 25 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | 0.50 | - | - | - | - |
| ......................GAATTTATCCTCAAGAGTCAGCTGGCA......................................................................................................................................................................................................... | 27 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................TCCTCAAGAGTCAGCTGGCAGG....................................................................................................................................................................................................... | 22 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................TCCTCAAGAGTCAGCTGGCA......................................................................................................................................................................................................... | 20 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |
| ...............................CTCAAGAGTCAGCTGGCAG........................................................................................................................................................................................................ | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - |
| ......................GAATTTATCCTCAAGAGTCAGCTGGCAG........................................................................................................................................................................................................ | 28 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| ........................ATTTATCCTCAAGAGTCAGCTGGCAG........................................................................................................................................................................................................ | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| ............................ATCCTCAAGAGTCAGCTGGCAGG....................................................................................................................................................................................................... | 23 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................AGAATTTATCCTCAAGAGTCAGCTGGCAt........................................................................................................................................................................................................ | 29 | t | 0.50 | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - |
| ...................TGAGAATTTATCCTCAAGAGTCAGCTG............................................................................................................................................................................................................ | 27 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................CCTCAAGAGTCAGCTGGCAG........................................................................................................................................................................................................ | 20 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| ...............TAGTTGAGAATTTATCCTCAAGAGTCA................................................................................................................................................................................................................ | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - |
| ....................GAGAATTTATCCTCAAGAGTCAGCTGGCAG........................................................................................................................................................................................................ | 30 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................CAAGAGTCAGCTGGCAG........................................................................................................................................................................................................ | 17 | 4 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CAGAAAATCGACTTATAGTTGAGAATTTATCCTCAAGAGTCAGCTGGCAGGTTTGTTGAAATACAGTTTTGAGATATTTTTTAATGTGGCATTTAAAAGTGTTAATGGGTAGTTAATGTTTTATTAATATATATCTTATTAAATGCTTTATCTTAAATTAATTTAATTGAACTATAATTTTAAACTTTAGTTAAATGTAACTGGGGGATGTTTCAGATTTTAATATTAGTGATCAAATGTAAATGTTTTG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR014237(GSM319961) 10 dpp MILI-KO total. (mili testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
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