(7)
OTHER.mut
(2)
OVARY
(2)
PIWI.ip
(1)
PIWI.mut
(23)
TESTES

Sense strand
ATCAAACATGGCTGCTCTGGACGGGAAAATGCATTCGACTCCCGGAGCAGGTGAGTGTAAGGCGCAGGGAAGATTGCGAGGGTGCTGTCCACGACCCCGCTAGGGGGAGCATCCCTGTCCCCCAGCCTCCCGGCTCCACAGTTCAGTCCCAGATTGATCCCCTAATCTTTAGCCTCTGTCTTAACAGAAGGCTCTAACCAAGGGAGTTTTCATCCTTACCAAGGCATCCACCAACCTAGAGATTTGTAGCCTGACAAAATGTTCAGGAGGGAATGCGGAAGTAAATGTATGTGTCTGCACCCCAGGCTAGCAAAAATATTAAGATTGTTATATGTGAGGTCTGCGGTAGAAGATGAGGTACACCCCTTAGAGAAAGAGACGGCTCTCAAAAAGAGATAGTAACAGGTCAAATTAAACCCAAAACAGTCATTAGAAAAGTAAGTTCTGCCGTTTCTTTTCGGGCCAGCAGCTGGTGGTTCATCTAAAGTTTCGTTTCTTCTCAGCTCGTGTGGTGTTTCTAGGGGGTACTTCACGGATGAGAAAATTGAGAATG


Size Perfect hit Total Norm Perfect Norm SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesWT1()
Testes Data. (testes)
mjTestesWT2()
Testes Data. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM475281(GSM475281)
total RNA. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR037902(GSM510438)
testes_rep3. (testes)
..........................................................................................................................................................................................GAAGGCTCTAACCAAGGG............................................................................................................................................................................................................................................................................................................................................................. 18 1 8.00 8.00 - - 8.00 - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................GATTTGTAGCCTGACgaca...................................................................................................................................................................................................................................................................................................... 19 gaca 3.00 0.00 - - - 3.00 - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................................TCTGCGGTAGAAGAaaaa.................................................................................................................................................................................................... 18 aaaa 3.00 0.00 3.00 - - - - - - - - - - - - - - - - - - - - - - - -
........................................CCCGGAGCAGGTGAGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 18 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - -
........TGGCTGCTCTGGACGGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 18 1 2.00 2.00 - - - - - - - - - 2.00 - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................CTGCGGTAGAAGATGtg.................................................................................................................................................................................................... 17 tg 2.00 0.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - -
..............CTCTGGACGGGAAAATGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 20 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...............................................CAGGTGAGTGTAAGGCGCAGGGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 24 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
.......ATGGCTGCTCTGGACGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 17 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
..........GCTGCTCTGGACGGGAAAATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 21 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...................GACGGGAAAATGCATTCGtc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 20 tc 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................................................................................AGGTCTGCGGTAGAAGAT....................................................................................................................................................................................................... 18 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
.........................................................................TTGCGAGGGTGCTGTCCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 18 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.....................................ACTCCCGGAGCAGGTtag.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 18 tag 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAGAAAATTGAtggc. 18 tggc 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
...........CTGCTCTGGACGGGAAAATGCATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 24 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...........................................................AGGCGCAGGGAAGATTGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 19 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTCATCTAAAGTTTCGTTTCTTCTCAG.................................................. 30 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.........................................CCGGAGCAGGTGAGTGTAAGGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 23 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................................................................TATGTGAGGTCTGCGGTAGAAGATGA..................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
...........CTGCTCTGGACGGGAAAATGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 23 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACGGATGAGAAAAT........ 17 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
...............................................CAGGTGAGTGTAAGGCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 18 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...........CTGCTCTGGACGGGAAAATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 20 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
............................................................................................................................................................................................................................................................................................................................................TGTGAGGTCTGCGGTAGAAGATGAGG................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
...................................CGACTCCCGGAGCAGGTGAGTGTAAGcc.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 28 cc 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.......................................TCCCGGAGCAGGTGAGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 18 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................GTGCTGTCCACGACCCCGCTAGGGGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................ 28 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.....................................................AGTGTAAGGCGCAGGGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 18 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................................................................................................ATGAGGTACACCCCTTAGAGAAAGAGACGGC.......................................................................................................................................................................... 31 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
...................................CGACTCCCGGAGCAGGTGAGTGTAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
......................................CTCCCGGAGCAGGTGAGTGTAAGGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
..........................................CGGAGCAGGTGAGTGTAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 19 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.....................................................................AAGATTGCGAGGGTGCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 18 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
......................GGGAAAATGCATTCGACTCCCGGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
........TGGCTGCTCTGGACGGGAAAATGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
................................................AGGTGAGTGTAAGGCGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 19 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.................................................................AGGGAAGATTGCGAGGGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 19 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCGGGCCAGggc.................................................................................... 15 ggc 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
....................................GACTCCCGGAGCAGGTGAGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 21 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.............GCTCTGGACGGGAAAATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 18 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
....................................................GAGTGTAAGGCGCAGGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 18 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
.....................................................................................................................................................................................TAACAGAAGGCTCTAACCAAGGGAGTa......................................................................................................................................................................................................................................................................................................................................................... 27 a 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
...............TCTGGACGGGAAAATGCATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 20 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.............GCTCTGGACGGGAAAATGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 21 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..........GCTGCTCTGGACGGGAAAATGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 23 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
..............................................GCAGGTGAGTGTAAGGCGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 21 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.......ATGGCTGCTCTGGACGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 18 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................TTTGTAGCCTGACAAAA...................................................................................................................................................................................................................................................................................................... 17 3 0.33 0.33 - - - 0.33 - - - - - - - - - - - - - - - - - - - - -
.....................................ACTCCCGGAGCAGGTGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 18 4 0.25 0.25 - - - - - - - - 0.25 - - - - - - - - - - - - - - - -

Antisense strand
ATCAAACATGGCTGCTCTGGACGGGAAAATGCATTCGACTCCCGGAGCAGGTGAGTGTAAGGCGCAGGGAAGATTGCGAGGGTGCTGTCCACGACCCCGCTAGGGGGAGCATCCCTGTCCCCCAGCCTCCCGGCTCCACAGTTCAGTCCCAGATTGATCCCCTAATCTTTAGCCTCTGTCTTAACAGAAGGCTCTAACCAAGGGAGTTTTCATCCTTACCAAGGCATCCACCAACCTAGAGATTTGTAGCCTGACAAAATGTTCAGGAGGGAATGCGGAAGTAAATGTATGTGTCTGCACCCCAGGCTAGCAAAAATATTAAGATTGTTATATGTGAGGTCTGCGGTAGAAGATGAGGTACACCCCTTAGAGAAAGAGACGGCTCTCAAAAAGAGATAGTAACAGGTCAAATTAAACCCAAAACAGTCATTAGAAAAGTAAGTTCTGCCGTTTCTTTTCGGGCCAGCAGCTGGTGGTTCATCTAAAGTTTCGTTTCTTCTCAGCTCGTGTGGTGTTTCTAGGGGGTACTTCACGGATGAGAAAATTGAGAATG


Size Perfect hit Total Norm Perfect Norm SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesWT1()
Testes Data. (testes)
mjTestesWT2()
Testes Data. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM475281(GSM475281)
total RNA. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR037902(GSM510438)
testes_rep3. (testes)
...........................................................................................................................AGCCTCCCGGCTCCACAGTTC......................................................................................................................................................................................................................................................................................................................................................................................................................... 21 1 4.00 4.00 - - - - - 4.00 - - - - - - - - - - - - - - - - - - -
..................................................................................................................................CGGCTCCACAGTTCAGTC..................................................................................................................................................................................................................................................................................................................................................................................................................... 18 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................CCCCCAGCCTCCCGGCTCCACAGTTCA........................................................................................................................................................................................................................................................................................................................................................................................................................ 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
....................................................TGTAAGGCGCAGGGAgtc................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 18 gtc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00
...........................................................................................................................................................................CTGTCTTAACAGAAtcag............................................................................................................................................................................................................................................................................................................................................................................ 18 tcag 1.00 0.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
...............................................................................................................................................................CCCTAATCTTTAGCCTCTGTCTTAACA............................................................................................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.......................................................................................................................CCCCAGCCTCCCGGCTCCACAGTTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................ACCAACCTAGAGATTTGTAGCCTGACA......................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
..............................................GCAGGTGAGTGTAAGGCGCAGGGAAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................TCCCGGCTCCACAGTTCAGTCCCAGAT............................................................................................................................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
......................................................................................................................................................................................................................CCAAGGCATCCACCAcgat................................................................................................................................................................................................................................................................................................................................ 19 cgat 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
........................................................................................................................CCAGCCTCCCGGCTCCACAa............................................................................................................................................................................................................................................................................................................................................................................................................................. 20 a 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAAGTAAGTTCTGCCG....................................................................................................... 19 2 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - -