| Gene: 6330442E10Rik | ID: uc007nzq.1_intron_1_0_chr12_80078929_r.5p | SPECIES: mm9 |
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(3) OTHER.mut |
(4) PIWI.ip |
(2) PIWI.mut |
(17) TESTES |
| GCGCCTGTCAGAAGCGAGCATGTGCAGTTTGCACCGCATCCGTACTATGGGTGAGTGCGGCCGCCGCCGCTTGGGGCTGGGTTCCGTGGGGCAGCAGCGGCTGCAGCTACCCGGGCCCCGCGCCGCCCCGGCGGCCGCGGACACTGGATGCGGGAATAGTCGCGGGCGGGTGGCGTGGGGGAGTCTCGTCCGGTCACTCGGCGCGGGGGGAGCCGGAGCGCCGGGCGTGGGGGCAGGGAACAGGCGGCGC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................TGGATGCGGGAATAGTCGCGGGCGG................................................................................. | 25 | 1 | 11.00 | 11.00 | - | 1.00 | 3.00 | 1.00 | - | 3.00 | 1.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - |
| ....................................................................GCTTGGGGCTGGGTTCCGTGGGGCAGCAGCG....................................................................................................................................................... | 31 | 1 | 9.00 | 9.00 | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................GGAATAGTCGCGGGCGGGTGGCGTG......................................................................... | 25 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................TGGATGCGGGAATAGTCGCGGGCGGG................................................................................ | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ................................................................................................................................................TGGATGCGGGAATAGTCGCGGGC................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................TGGATGCGGGAATAGTCGCGGGCGt................................................................................. | 25 | t | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......TCAGAAGCGAGCATGTGCAGTTTGCACC....................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......TCAGAAGCGAGCATGTGCAGTTTGCAC........................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................TAGTCGCGGGCGGGTGGCGTGGGGt..................................................................... | 25 | t | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................GCCGGGCGTGGGGGCAta............. | 18 | ta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................CGCGGGGGGAGCagc.................................. | 15 | agc | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..GCCTGTCAGAAGCGAGCATGTGCAGT.............................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................GCCGGGCGTGGGGGCAGGGAACAGGCG.... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................................................................................................................................................................GCGGGGGGAGCCGGAGCGCC............................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................................................................TGGATGCGGGAATAGTCGCGGGggg................................................................................. | 25 | ggg | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................GCCGCGGACACTGGATGC................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GCGCCTGTCAGAAGCGAGCATGTGCAGTTTGCACCGCATCCGTACTATGGGTGAGTGCGGCCGCCGCCGCTTGGGGCTGGGTTCCGTGGGGCAGCAGCGGCTGCAGCTACCCGGGCCCCGCGCCGCCCCGGCGGCCGCGGACACTGGATGCGGGAATAGTCGCGGGCGGGTGGCGTGGGGGAGTCTCGTCCGGTCACTCGGCGCGGGGGGAGCCGGAGCGCCGGGCGTGGGGGCAGGGAACAGGCGGCGC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................GTCGCGGGCGGGTGGCGTGGGGGA.................................................................... | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................GCCGGAGCGCCGGgg.......................... | 15 | gg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................................CTACCCGGGCCCCGCGCCGCCCCGGCGGC................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............................................................................................................................................................................................................GCCGGAGCGCCGGggct.......................... | 17 | ggct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................TGTGCAGTTTGCACCGCATCCGTACTAcg........................................................................................................................................................................................................... | 29 | cg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .................................................................................................................CCCCGCGCCGCCCCGGtc....................................................................................................................... | 18 | tc | 0.33 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 |
| ...................................................................................................................CCCCGCGCCGCCCCGG....................................................................................................................... | 16 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - |