| Gene: Myn | ID: uc007nyv.1_intron_1_0_chr12_78040502_r | SPECIES: mm9 |
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(1) OTHER.mut |
(6) PIWI.ip |
(2) PIWI.mut |
(19) TESTES |
| GCAAGACATTGATGACCTCAAGCGGCAGAATGCTCTTCTGGAGCAACAAGGTGAGCAACCAAGCTCATGGGGCAACTGGCCCTGCTGTGCCCCGCCAGGCGGGGGCTTCCACACCTGGGCTTCCGTCAAAGCTAGAGGACTATGCCTCAGAAGCAAGCTCAGCCTGGCTCTGCAGGCCTTGCAGTTGAGTGTTAGAGCCTCCAGTGAGGAGACGGAGGAGCTAGGGATTGGACATCCGAAGGCTTGTATCTTTTCTGGCCTGACCTCTCCCTTTCTCGGGGCTCAGGTTCTCTGCCTACAGTAAGGGTCACACCTGGTGTCAGGTATCTGAACAGAGCTTTGAGGTCCTTGCTGTAGAATGTGCCATGTAAGTACCAGATTCTCCAGGAGTTCAGGGACAGTGAGCCCTCCCCATTGTCAATAGTAGTCCAATCAGGGCAGCCTATGGGCCAGGCCCCTGCTGTTCTCCAATGCTCACACCCGCCTTTTCCTACAACCACAGGGGAAAGCGAGAGCTGATCAAGTTCTTTGTTCCTGGGGAATTCACTTCTC ..................................................................................................................................................................................................................................................................................................................................................................................................................((((.......((((..((((((((........((((.(((....)))...))))))))))))...))))))))............................................................................ ..................................................................................................................................................................................................................................................................................................................................................................................................................403................................................................................................502................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT1() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........TGATGACCTCAAGCGGCAGAATGCTCTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 12.00 | 12.00 | 7.00 | 2.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................AGGACTATGCCTCAGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................. | 19 | 1 | 9.00 | 9.00 | - | - | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TGGGCTTCCGTCAAAGCTAGAGGACT........................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 5.00 | 5.00 | 2.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........TGATGACCTCAAGCGGCAGAATGCTCTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 29 | 1 | 4.00 | 4.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................GTAGAATGTGCCATGTAAGTACCAGATTCTCCAG..................................................................................................................................................................... | 34 | 1 | 3.00 | 3.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........TGATGACCTCAAGCGGCAGAATGCTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......CATTGATGACCTCAAGCGGCAGAATGCTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 3.00 | 3.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................TCTGAACAGAGCTTTGAGGTCCTTGCT....................................................................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................ATCTGAACAGAGCTTTGAGGTCCTTG......................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCAATAGTAGTCCAATCAGGGCAGCC............................................................................................................. | 29 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............TGACCTCAAGCGGCAGAATGCTCTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TGGGCTTCCGTCAAAGCTAGAGGACTA.......................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........GATGACCTCAAGCGGCAGAATGCTCTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAGTTCTTTGTTCCTGGGGAATTC....... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................CAAGCGGCAGAATGCTCTTCTGGAGCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........TTGATGACCTCAAGCGGCAGAATGCTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................TCAAGCGGCAGAATGCTCTTCTGGAGCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................CATCCGAAGGCTTtcct............................................................................................................................................................................................................................................................................................................... | 17 | tcct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .........................................................................................................................TCCGTCAAAGCTAGAGGACTATGCCTC.................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................TCTGGAGCAACAAGGTGAGCAACCAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................CCATTGTCAATAGTAGTC........................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCAATAGTAGTCCAATCAGGGCAGCCT............................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................TGTGCCATGTAAGTACCAGATTCTCCA...................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................TTCTGGAGCAACAAGGTGAGCAACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........TGATGACCTCAAGCGGCAGAATGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................TAGGGATTGGACATagaa......................................................................................................................................................................................................................................................................................................................... | 18 | agaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCAATAGTAGTCCAATCAGGGCAGCCTA........................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............TGACCTCAAGCGGCAGAATGCTCTTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................TGCTGTAGAATGTGCCATGTAAGTACC................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............TGACCTCAAGCGGCAGAATGCTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............ACCTCAAGCGGCAGAATGCTCTTCTGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ....................................TCTGGAGCAACAAGGTGAGCAACCAAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................GATTGGACATCCGAAGGCTTGTATC.............................................................................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................CGGCAGAATGCTCTTCTGGAGCAACAAGtc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 30 | tc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......ATTGATGACCTCAAGCGGCAGAATGCTCTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................TATCTTTTCTGGCCTGACCTCTCCCTT....................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGCTGATCAAGTgagt....................... | 19 | gagt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........TGATGACCTCAAGCGGCAGAATGCTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........GATGACCTCAAGCGGCAGAATGCTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................ACCAGATTCTCCAGGAG.................................................................................................................................................................. | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| GCAAGACATTGATGACCTCAAGCGGCAGAATGCTCTTCTGGAGCAACAAGGTGAGCAACCAAGCTCATGGGGCAACTGGCCCTGCTGTGCCCCGCCAGGCGGGGGCTTCCACACCTGGGCTTCCGTCAAAGCTAGAGGACTATGCCTCAGAAGCAAGCTCAGCCTGGCTCTGCAGGCCTTGCAGTTGAGTGTTAGAGCCTCCAGTGAGGAGACGGAGGAGCTAGGGATTGGACATCCGAAGGCTTGTATCTTTTCTGGCCTGACCTCTCCCTTTCTCGGGGCTCAGGTTCTCTGCCTACAGTAAGGGTCACACCTGGTGTCAGGTATCTGAACAGAGCTTTGAGGTCCTTGCTGTAGAATGTGCCATGTAAGTACCAGATTCTCCAGGAGTTCAGGGACAGTGAGCCCTCCCCATTGTCAATAGTAGTCCAATCAGGGCAGCCTATGGGCCAGGCCCCTGCTGTTCTCCAATGCTCACACCCGCCTTTTCCTACAACCACAGGGGAAAGCGAGAGCTGATCAAGTTCTTTGTTCCTGGGGAATTCACTTCTC ..................................................................................................................................................................................................................................................................................................................................................................................................................((((.......((((..((((((((........((((.(((....)))...))))))))))))...))))))))............................................................................ ..................................................................................................................................................................................................................................................................................................................................................................................................................403................................................................................................502................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT1() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................GCAACTGGCCCgcaa...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 15 | gcaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |