| Gene: Nua | ID: uc007nxo.1_intron_14_0_chr12_77009934_f | SPECIES: mm9 |
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(10) OTHER.mut |
(2) OVARY |
(3) PIWI.ip |
(3) PIWI.mut |
(30) TESTES |
| TCAACTTGATGCTTCTTTTCAAAAATGTGAAGAAATGTATAAGAACTCGGGTAAAGTATCCTAGTTGCTTTTTAATGGGTCAGCTATCATTTCAAGATGAGTATTGTTTTACTTTGATGGTTTGGACATTAACTGTTTTCATCCCTGCTTTCCTTTCTTTTGCTTTTAATATTGTTAGGCAACATGCTTGTTGGTTAATGCAAATAATTTTCTTAGTATCAGTTACAAACAAAAACCGTTTTGTAAGACTTGTTGTTTTTGTTTGTTTTGCTGATGCAGCCAGAGAATGTGAGAGTATTAGAGAGGAGTATATGATGCTGGAAAAGAAT ...................................................................................................................................................................................(((((....)))))......................((((((((.((((((((((((.((((....)))).....))))))))))))...)))))))).................................................... ...................................................................................................................................................................................180................................................................................................279................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR014237(GSM319961) 10 dpp MILI-KO total. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR037897(GSM510433) ovary_rep2. (ovary) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................................................................................................................TTTGTTTGTTTTGCTGATGCAGt................................................. | 23 | t | 79.00 | 53.00 | 4.00 | 3.00 | 8.00 | 4.00 | 10.00 | 20.00 | 7.00 | 3.00 | 5.00 | 3.00 | 2.00 | 2.00 | - | - | 3.00 | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 |
| ................................................................................................................................................................................................................................................................TTTTGTTTGTTTTGCTGATGCAG.................................................. | 23 | 1 | 74.00 | 74.00 | 24.00 | 10.00 | 13.00 | 10.00 | 5.00 | - | 1.00 | 1.00 | 1.00 | 2.00 | - | - | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................TTTGTTTGTTTTGCTGATGCAG.................................................. | 22 | 1 | 53.00 | 53.00 | 21.00 | 15.00 | - | 3.00 | 1.00 | - | 3.00 | 2.00 | 1.00 | - | - | - | 2.00 | 1.00 | - | 2.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................TTTTGTTTGTTTTGCTGATGCAGt................................................. | 24 | t | 32.00 | 74.00 | 4.00 | 1.00 | 6.00 | - | 5.00 | - | - | 1.00 | 1.00 | 2.00 | 2.00 | 1.00 | - | 2.00 | 3.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - |
| ...............................................................................................................................................................................................................................................................TTTTTGTTTGTTTTGCTGATGCAG.................................................. | 24 | 1 | 9.00 | 9.00 | 6.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................TTTTTGTTTGTTTTGCTGATGC.................................................... | 22 | 1 | 6.00 | 6.00 | - | - | - | 5.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................TTTGTTTGTTTTGCTGATGC.................................................... | 20 | 1 | 5.00 | 5.00 | 1.00 | - | - | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................TTTTGTTTGTTTTGCTGATGCAGa................................................. | 24 | a | 4.00 | 74.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................TTTTGTTTGTTTTGCTGATGCA................................................... | 22 | 1 | 4.00 | 4.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................TTTTTGTTTGTTTTGCTGATG..................................................... | 21 | 1 | 4.00 | 4.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................TTTTGTTTGTTTTGCTGATGC.................................................... | 21 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................TTTTTGTTTGTTTTGCTGATGCA................................................... | 23 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................TTTGTTTGTTTTGCTGATGCAGa................................................. | 23 | a | 3.00 | 53.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................TTTGTTTGTTTTGCTGATGCA................................................... | 21 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................TTTGTTTGTTTTGCTGATGCAGtata.............................................. | 26 | tata | 2.00 | 53.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................TTTTGTTTGTTTTGCTGATGCAGtt................................................ | 25 | tt | 2.00 | 74.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................AATGTATAAGAACTCGG....................................................................................................................................................................................................................................................................................... | 17 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................GAAGAAATGTATAAGAACTCGGcc..................................................................................................................................................................................................................................................................................... | 24 | cc | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................TTTTGTTTGTTTTGCTGATG..................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................TTTGTTTGTTTTGCTGATGCAGtat............................................... | 25 | tat | 1.00 | 53.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................TTTGTTTGTTTTGCTGATGCtgt................................................. | 23 | tgt | 1.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................TTTTGTTTGTTTTGCTGATGaac.................................................. | 23 | aac | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................TTTTGTTTGTTTTGCTGATGCAt.................................................. | 23 | t | 1.00 | 4.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................TTTTGTTTGTTTTGCTGATGCAGtaa............................................... | 26 | taa | 1.00 | 74.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................AAATGTGAAGAAATGTATAAGAACTCGGc...................................................................................................................................................................................................................................................................................... | 29 | c | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................TTTTGTTTGTTTTGCTGATGCAtt................................................. | 24 | tt | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................TTTCAAAAATGTGAAGAAATGTATAAG.............................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................TTTTTGTTTGTTTTGCTGATGtaa.................................................. | 24 | taa | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................TATTAGAGAGGAGTATATGATGCTGGAA...... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................................................................................................................................................................................................................................................TTTTGTTTGTTTTGCTGATacag.................................................. | 23 | acag | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................TTTTTGTTTGTTTTGCTGATGCAtt................................................. | 25 | tt | 1.00 | 3.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................AATGTGAAGAAATGTATAAGAACTCGG....................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................TTTTGTTTGTTTTGCTGATtcag.................................................. | 23 | tcag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TAATGGGTCAGCgact................................................................................................................................................................................................................................................. | 16 | gact | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................TTTGTTTGTTTTGCTGATGCAGtag............................................... | 25 | tag | 1.00 | 53.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................GTTTTACTTTGATGGagt.............................................................................................................................................................................................................. | 18 | agt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................................................................................................................................................................................................................................TTGTTTGTTTTGCTGATGCAG.................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................GTTTGTTTTGCTGATGCAGt................................................. | 20 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................AAAATGTGAAGAAATGTATAAGAACTCGG....................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................TTTTTGTTTGTTTTGCTGATGCAa.................................................. | 24 | a | 1.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................AAATGTATAAGAACTCGGc...................................................................................................................................................................................................................................................................................... | 19 | c | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................TTTGTTTGTTTTGCTGATGCcg.................................................. | 22 | cg | 1.00 | 5.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................TTTTGTTTGTTTTGCTGATGCcgt................................................. | 24 | cgt | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................ATGTATAAGAACTCGG....................................................................................................................................................................................................................................................................................... | 16 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................TGTATAAGAACTCGGG...................................................................................................................................................................................................................................................................................... | 16 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................TTTGTTTGTTTTGCTGATG..................................................... | 19 | 4 | 0.25 | 0.25 | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TCAACTTGATGCTTCTTTTCAAAAATGTGAAGAAATGTATAAGAACTCGGGTAAAGTATCCTAGTTGCTTTTTAATGGGTCAGCTATCATTTCAAGATGAGTATTGTTTTACTTTGATGGTTTGGACATTAACTGTTTTCATCCCTGCTTTCCTTTCTTTTGCTTTTAATATTGTTAGGCAACATGCTTGTTGGTTAATGCAAATAATTTTCTTAGTATCAGTTACAAACAAAAACCGTTTTGTAAGACTTGTTGTTTTTGTTTGTTTTGCTGATGCAGCCAGAGAATGTGAGAGTATTAGAGAGGAGTATATGATGCTGGAAAAGAAT ...................................................................................................................................................................................(((((....)))))......................((((((((.((((((((((((.((((....)))).....))))))))))))...)))))))).................................................... ...................................................................................................................................................................................180................................................................................................279................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR014237(GSM319961) 10 dpp MILI-KO total. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR037897(GSM510433) ovary_rep2. (ovary) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
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