| Gene: Daam1 | ID: uc007nux.1_intron_24_0_chr12_73090044_f.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(1) OVARY |
(2) PIWI.ip |
(1) PIWI.mut |
(18) TESTES |
| ACTTACCTAGCCACTGGGAAGCGTTGGTTTTCACTGTCCGTTGCTTTTGCAGTGAGCTCTCTCTTCACCCGTACAGGTTAGCAGCCATAGCAGAACATGGCTTCACATAGGAGATTCATTCCCTGCCGTGGCCCAGAATCCTTCCCTCTGTGCAGAAAACAAAGTATACTCTAACCTAAGAGGACTCTTTCTCTGCACAGCTCAAAGAGCAGCGGGAGAGGGAGCGGAAGGTGAGGAAGGCCAAGGAGAG ...................................................................................................................................................(((((((((....((((....((((......))))....)))).))))))))).................................................. .............................................................................................................................................142.......................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................AGGACTCTTTCTCTGCACAGt................................................. | 21 | t | 6.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | 1.00 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - |
| ...................................................GTGAGCTCTCTCTTCccag.................................................................................................................................................................................... | 19 | ccag | 4.00 | 0.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................AGGACTCTTTCTCTGCACAGtt................................................ | 22 | tt | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................AGGACTCTTTCTCTGCACAGa................................................. | 21 | a | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TCTAACCTAAGAGGAtga............................................................... | 18 | tga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................................................................................................................TCTGTGCAGAAAACAAAGTATACT................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................................................................TCTGTGCAGAAAACAAAGTATACTCTAACC.......................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TCCCTCTGTGCAGAAAACAAAGTATACTCTAt............................................................................ | 32 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................................................................CCTCTGTGCAGAAAACAAAGTATACTCTAACC.......................................................................... | 32 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................TGCAGAAAACAAAGTATACTCTAACCTA........................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ACTTACCTAGCCACTGGGAAGCGTTGGTTTTCACTGTCCGTTGCTTTTGCAGTGAGCTCTCTCTTCACCCGTACAGGTTAGCAGCCATAGCAGAACATGGCTTCACATAGGAGATTCATTCCCTGCCGTGGCCCAGAATCCTTCCCTCTGTGCAGAAAACAAAGTATACTCTAACCTAAGAGGACTCTTTCTCTGCACAGCTCAAAGAGCAGCGGGAGAGGGAGCGGAAGGTGAGGAAGGCCAAGGAGAG ...................................................................................................................................................(((((((((....((((....((((......))))....)))).))))))))).................................................. .............................................................................................................................................142.......................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
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| .........................GTTTTCACTGTCCGTTGCTTTTGCAa....................................................................................................................................................................................................... | 26 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................GTGCAGAAAACAAAGTATA.................................................................................. | 19 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | 0.50 |
| ................................................................................................................GATTCATTCCCTGCCGTGGCCCAGA................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .................................................................CGTACAGGTTAGCAGCCATAGCAcgtg.............................................................................................................................................................. | 27 | cgtg | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |