| Gene: Hbp1 | ID: uc007nhu.1_intron_1_0_chr12_32613591_r.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(14) TESTES |
| AAAAAATACAGAGTTGAATATACTCAGATGTATCCAGGGAAAGATAACAGGTAAATAAAATAGTAATGACTGCAACTCTTGACTTGTCAGGGCAGTTCACAGTAACTGTGCCTGCAAAATAAACTCCTTCAGTGTCGTTTGTTGATTTCTTCCCATTTTCTTATGTTGACTTTACATATATAGTTTTTATAATATATAGATTGTACTATGAGCTGCTATGTGGGTGCCAGGATATGAACCTGGGTCCTCT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTAAATAAAATAGTAATGACTGCAACTCTTGACTTGTCAGGGCAGTTCACAG.................................................................................................................................................... | 52 | 1 | 57.00 | 57.00 | 57.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................ACTCAGATGTATCCAGGGAAAGATAAC.......................................................................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............TGAATATACTCAGATGTATCCAGGGA.................................................................................................................................................................................................................. | 26 | 2 | 2.00 | 2.00 | - | - | - | 0.50 | - | - | - | - | 1.00 | - | - | - | 0.50 | - |
| ................................................................................................TCACAGTAACTGTGCCTGCAAAATAAACT............................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................TGACTGCAACTCTTGACTTGTCAGaa.............................................................................................................................................................. | 26 | aa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ........................CAGATGTATCCAGGGAAAGATAACAG........................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................GCAACTCTTGACTTGTCAGGGCAGTT......................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................CAGATGTATCCAGGGAAAG............................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................TATACTCAGATGTATCCAGGGAAAGAT............................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................AATGACTGCAACTCTTGACTTGTCAGGGC............................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............TGAATATACTCAGATGTATCCAGG.................................................................................................................................................................................................................... | 24 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| .................................CCAGGGAAAGATAACAG........................................................................................................................................................................................................ | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |
| AAAAAATACAGAGTTGAATATACTCAGATGTATCCAGGGAAAGATAACAGGTAAATAAAATAGTAATGACTGCAACTCTTGACTTGTCAGGGCAGTTCACAGTAACTGTGCCTGCAAAATAAACTCCTTCAGTGTCGTTTGTTGATTTCTTCCCATTTTCTTATGTTGACTTTACATATATAGTTTTTATAATATATAGATTGTACTATGAGCTGCTATGTGGGTGCCAGGATATGAACCTGGGTCCTCT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................TACTCAGATGTATCCAGGGAAAGATA............................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................TGCAACTCTTGACTTaact..................................................................................................................................................................... | 19 | aact | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |