chr12:8214949 8215198 +
(5)
OTHER.mut 		(5)
PIWI.ip 		(2)
PIWI.mut 		(24)
TESTES

Sense strand
CGGGTCTGGTGAGGCTTTGCCGAGACGTCGGCGGACGACCCCAATACCTTGTGAGTGGGCAGGTGAGGTGATGCTGCCAGTACTGTGTGGTTTGTCTGAGGAAGGGCACGTGGGCTGCGCATGGGGTGGTGCTAGGATAACTGAGCTGCCATCACCCCGCGTGCACAGCCGCTAGGCCGTGCGGTACGCGATGGCACTACACTCGCCCGACCTGTGGCCAGGTCGCCAGAGGCTCCCTGGGTAAGGATAA


 Size Perfect hit Total Norm Perfect Norm SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes) 		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes) 		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes) 		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes) 		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes) 		GSM509280(GSM509280)
small RNA cloning by length. (testes) 		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes) 		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes) 		mjTestesWT4()
Testes Data. (testes) 		SRR014236(GSM319960)
10 dpp total. (testes) 		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes) 		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes) 		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) 		mjTestesKO8()
Testes Data. (Zcchc11 testes) 		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes) 		mjTestesKO5()
Testes Data. (Zcchc11 testes) 		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes) 		SRR014229(GSM319953)
10 dpp MILI. (mili testes) 		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes) 		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes) 		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes) 		mjTestesWT2()
Testes Data. (testes) 		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes) 		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
................................................................................TACTGTGTGGTTTGTCTGAGGAAGG................................................................................................................................................. 25 1 3.00 3.00 - 1.00 - - - - - - - - 1.00 - - - - 1.00 - - - - - - - -
......................AGACGTCGGCGGAag..................................................................................................................................................................................................................... 15 ag 3.00 0.00 - - - 2.00 - - 1.00 - - - - - - - - - - - - - - - - -
.....................................................................................TGTGGTTTGTCTGAGGAAGG................................................................................................................................................. 20 2 2.50 2.50 - - - - - - - - 2.50 - - - - - - - - - - - - - - -
......................AGACGTCGGCGGAagt.................................................................................................................................................................................................................... 16 agt 2.00 0.00 2.00 - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................ACCCCGCGTGCACAGCCG............................................................................... 18 1 2.00 2.00 - - - - - - - - - - - - 2.00 - - - - - - - - - - -
............GGCTTTGCCGAGACGTCGGCGGA....................................................................................................................................................................................................................... 23 1 2.00 2.00 - - - - - - 1.00 - - - - - - - 1.00 - - - - - - - - -
.....................................................................................................................................................................................CGGTACGCGATGGCACTAC.................................................. 19 1 2.00 2.00 - - 2.00 - - - - - - - - - - - - - - - - - - - - -
...............................................................................GTACTGTGTGGTTTGTCTGAGGAAG.................................................................................................................................................. 25 1 2.00 2.00 - - - - - - - - - - - - - 2.00 - - - - - - - - - -
.....................GAGACGTCGGCGGAag..................................................................................................................................................................................................................... 16 ag 2.00 0.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - -
............GGCTTTGCCGAGACGTCGGCGGt....................................................................................................................................................................................................................... 23 t 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...........AGGCTTTGCCGAGACGTCGc........................................................................................................................................................................................................................... 20 c 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..............................................................................................TCTGAGGAAGGGCACGTG.......................................................................................................................................... 18 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - -
.......GGTGAGGCTTTGCCGAGACGT.............................................................................................................................................................................................................................. 21 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
...............................................................................GTACTGTGTGGTTTGTCTGAGGAAGGGC............................................................................................................................................... 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
................................................................................TACTGTGTGGTTTGTCTGAGGAAGGG................................................................................................................................................ 26 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - -
..............................................................................................TCTGAGGAAGGGCACGTGGGCTGCGt.................................................................................................................................. 26 t 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................TGCCAGTACTGTGTGGTTTGTCTGAG...................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - -
...................................................................................................................................................................................TGCGGTACGCGATGGCACTACACTCG............................................. 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...................CCGAGACGTCGGCGGAC...................................................................................................................................................................................................................... 17 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - -
....................................................................................................................................TAGGATAACTGAGCTGCCATCACtcc............................................................................................ 26 tcc 1.00 0.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - -
............................................................................................................................................................................TAGGCCGTGCGGTACGCGATGGCACT.................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - -
..............................................CCTTGTGAGTGGGCAGGTGAGttga................................................................................................................................................................................... 25 ttga 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
..................GCCGAGACGTCGGCGGACGACCCCAA.............................................................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - -
....................................................................................................................................TAGGATAACTGAGCTGCCATCACCCC............................................................................................ 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - -
....................................................................................................................................TAGGATAACTGAGCTGCCATCACCCCGCGT........................................................................................ 30 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..........................................................................TGCCAGTACTGTGTGGTTTGTCTGA....................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - -
..........GAGGCTTTGCCGAGACGTCG............................................................................................................................................................................................................................ 20 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - -
...............................................................................GTACTGTGTGGTTTGTCTGAGGAAGGG................................................................................................................................................ 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
......TGGTGAGGCTTTGCCGAGACGTCGGCGGAC...................................................................................................................................................................................................................... 30 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - -
..............................................................................................TCTGAGGAAGGGCACGTGGGCTGCGC.................................................................................................................................. 26 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.GGGTCTGGTGAGGCTTTGCCGAGACGT.............................................................................................................................................................................................................................. 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...GTCTGGTGAGGCTTTGCCGAGAC................................................................................................................................................................................................................................ 23 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
................................................................................................TGAGGAAGGGCACGTGGGCTGCGCA................................................................................................................................. 25 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
............................................................................CCAGTACTGTGTGGTTTGTCTGAGG..................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................TACACTCGCCCGACCTGTGGCCAGGTCGCCA...................... 31 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 -
...........AGGCTTTGCCGAGACGTCGGCGGACGACCCC................................................................................................................................................................................................................ 31 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................CGGTACGCGATGGCACTA................................................... 18 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..................GCCGAGACGTCGGCGGACGA.................................................................................................................................................................................................................... 20 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................TGCGGTACGCGATGGCACTACACTC.............................................. 25 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - -
....................................................................................................................................TAGGATAACTGAGCTGCCATCACCCCG........................................................................................... 27 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - -

Antisense strand
CGGGTCTGGTGAGGCTTTGCCGAGACGTCGGCGGACGACCCCAATACCTTGTGAGTGGGCAGGTGAGGTGATGCTGCCAGTACTGTGTGGTTTGTCTGAGGAAGGGCACGTGGGCTGCGCATGGGGTGGTGCTAGGATAACTGAGCTGCCATCACCCCGCGTGCACAGCCGCTAGGCCGTGCGGTACGCGATGGCACTACACTCGCCCGACCTGTGGCCAGGTCGCCAGAGGCTCCCTGGGTAAGGATAA


 Size Perfect hit Total Norm Perfect Norm SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes) 		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes) 		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes) 		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes) 		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes) 		GSM509280(GSM509280)
small RNA cloning by length. (testes) 		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes) 		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes) 		mjTestesWT4()
Testes Data. (testes) 		SRR014236(GSM319960)
10 dpp total. (testes) 		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes) 		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes) 		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) 		mjTestesKO8()
Testes Data. (Zcchc11 testes) 		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes) 		mjTestesKO5()
Testes Data. (Zcchc11 testes) 		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes) 		SRR014229(GSM319953)
10 dpp MILI. (mili testes) 		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes) 		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes) 		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes) 		mjTestesWT2()
Testes Data. (testes) 		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes) 		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
.....................................................................................................................................................................................................TACACTCGCCCGACCTGTGGCC............................... 22 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - -
..........................................................................TGCCAGTACTGTGTGGTTTGTCTGAGGAA................................................................................................................................................... 29 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................TGCTAGGATAACTtttc............................................................................................................ 17 tttc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00