| Gene: AK043922 | ID: uc007mzb.1_intron_1_0_chr12_7532778_r.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(1) PIWI.ip |
(9) TESTES |
| AGAGTCTGCTGAAGCAGGAAGAAACTGCAGCATACCACCAGAAGTTTTTGGTGAGTTTCTCTTTATGGAGTCCTGACAAATCCAGCTCACCTATGCAATGTAAGACAGACCAATACATGCATGCTATTAACAAAGAATCCTTCATCATGTGTCCTTTCACATGCTTGCTTTAGCAGAACATCCTTTCACCTGTGTCTGCTTCAGCTGTATGTTACTTCATGTGTGTGCCTCAGCAAAACACCATCCAACT ......................................................................................................((.(((((((.........(((((....(((.((.....))..((((((......)))))).)))...)))))(((......)))...)).))))))).................................................. ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................CTTTATGGAGTCCTGACAAATCCAGCTCACCTATGCAATGTAAGACAGACCA.......................................................................................................................................... | 52 | 1 | 38.00 | 38.00 | 38.00 | - | - | - | - | - | - | - | - |
| ......TGCTGAAGCAGGAAGAAA.................................................................................................................................................................................................................................. | 18 | 10 | 0.10 | 0.10 | - | - | - | - | - | - | - | - | 0.10 |
| AGAGTCTGCTGAAGCAGGAAGAAACTGCAGCATACCACCAGAAGTTTTTGGTGAGTTTCTCTTTATGGAGTCCTGACAAATCCAGCTCACCTATGCAATGTAAGACAGACCAATACATGCATGCTATTAACAAAGAATCCTTCATCATGTGTCCTTTCACATGCTTGCTTTAGCAGAACATCCTTTCACCTGTGTCTGCTTCAGCTGTATGTTACTTCATGTGTGTGCCTCAGCAAAACACCATCCAACT ......................................................................................................((.(((((((.........(((((....(((.((.....))..((((((......)))))).)))...)))))(((......)))...)).))))))).................................................. ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................CTTGCTTTAGCAGAACATCCTTTCAtt.............................................................. | 27 | tt | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - |
| ..............AAGAAACTGCAGCATACCACCAgaaa.................................................................................................................................................................................................................. | 26 | gaaa | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - |
| ...............................................................................................................................................................CTTGCTTTAGCAGAACATCCTTTCAtccg.............................................................. | 29 | tccg | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - |
| ...............................................................................................................................................................TGCTTGCTTTAGCAGAACATCCTTTCAag.............................................................. | 29 | ag | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................................................................................................................TGCTTTAGCAGAACATCCTTTCACCTGTtt......................................................... | 30 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - |
| .......................CAGCATACCACCAGAgtgt................................................................................................................................................................................................................ | 19 | gtgt | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................................................................................................................TGCTTGCTTTAGCAGAACATCCTTTCAcgtt.............................................................. | 31 | cgtt | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - |
| ................................................................................................................................................................TGCTTGCTTTAGCAGAACATCCTTTCACCTGa.......................................................... | 32 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - |