| Gene: Ncoa1 | ID: uc007mxr.1_intron_0_0_chr12_4249751_r.3p | SPECIES: mm9 |
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(4) OTHER.mut |
(16) TESTES |
| TTTAAGTGTGAACTTTCCAGAACCCTGAGCAAAATGAGTGCAGCGATTTTCTTTTTGTAGGACAAGAAGACAGAAGAGTTCTTCTCTGTGGTGACTACAGACTAGAGGAGCTCTAGTGAGTTTCCACTTCACGTAGTACCCACTCATAAGCCGGGGGGGCAGGCCCTTCTGTCTCAACACATCTTTTATTTGTGTTCCAGCAGGTGCAGCAGGTTCAGGTGTTTGCTGACGTCCAGTGTACAGTGAATCT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR037900(GSM510436) testes_rep1. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................AGACTAGAGGAGCTCTA....................................................................................................................................... | 17 | 1 | 8.00 | 8.00 | - | 3.00 | 2.00 | - | 1.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - |
| ......................................................TTGTAGGACAAGAAGACAGAA............................................................................................................................................................................... | 21 | 1 | 6.00 | 6.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................CAGACTAGAGGAGCTCTA....................................................................................................................................... | 18 | 1 | 6.00 | 6.00 | - | - | 1.00 | 2.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - |
| ........................................................................................TGGTGACTACAGACTAGAGGAGCTCTA....................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - |
| .................................................TCTTTTTGTAGGACAAGAAGACAG................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................TCTGTGGTGACTACAGACTAGAGGAGCTCTA....................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...................................................TTTTTGTAGGACAAGAAGg.................................................................................................................................................................................... | 19 | g | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................................TGAGTGCAGCGATTTTCTTTTTGTAG.............................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ....................................................................GACAGAAGAGTTCTTCTCTGTGGTGt............................................................................................................................................................ | 26 | t | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| TTTAAGTGTGAACTTTCCAGAACCCTGAGCAAAATGAGTGCAGCGATTTTCTTTTTGTAGGACAAGAAGACAGAAGAGTTCTTCTCTGTGGTGACTACAGACTAGAGGAGCTCTAGTGAGTTTCCACTTCACGTAGTACCCACTCATAAGCCGGGGGGGCAGGCCCTTCTGTCTCAACACATCTTTTATTTGTGTTCCAGCAGGTGCAGCAGGTTCAGGTGTTTGCTGACGTCCAGTGTACAGTGAATCT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR037900(GSM510436) testes_rep1. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................................AGGCCCTTCTGTCTCAACACATCTTTTA.............................................................. | 28 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |