| Gene: Dnmt3a | ID: uc007mxa.1_intron_1_0_chr12_3835261_f.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(2) PIWI.ip |
(1) PIWI.mut |
(14) TESTES |
| AAGCTGTACTCCGGCCCTCTGGATTTACTGGGATGGGGTTCAACTTTACCACACAGGAGGGTTGGGGACAGCATGACACAGCCCTGGAAATGTGACTGTTGTGGGGGTAGCACAGGAGGAGGCTCATGCCAATCCAGGTAGTCTGGAACACAGTCCCTCTCGGGTCAGCTCTGGCTTACAGGGTGTGTCTGTGTCCACAGGAAGGAGAGGAACAGGAGGAGAACCGTGGCAAGGAAGAGCGCCAGGAGCC ..............................................................................................................................((((......))))...(((.((((((.(((....)))...((((((.....))))))....)))))))))..................................................... .........................................................................................................................122...........................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................TCTGGAACACAGTCCCTCTCGG....................................................................................... | 22 | 1 | 5.00 | 5.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................AGGAGGAGAACCGTGGCAAGGAAGAG........... | 26 | 1 | 4.00 | 4.00 | - | 3.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................ACAGGGTGTGTCTGTGTCCACA................................................... | 22 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - |
| ..............................................................................................................................................................................................................GAGGAACAGGAGGAGAACCG........................ | 20 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................GAGGAGAACCGTGGCAAG................. | 18 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................GGGTGTGTCTGTGTCCACt................................................... | 19 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................GAGGAACAGGAGGAGAACCGTGGCAAGGAAG............. | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .................................................................................................................................................................................ACAGGGTGTGTCTGTGTCCACt................................................... | 22 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .................................................................................................................................................................................ACAGGGTGTGTCTGTGTCCA..................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..............................................................................................................................TGCCAATCCAGGTAGTCTGGAACACAG................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................GGAGAACCGTGGCAAGGAAGA............ | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................CTGGAACACAGTCCCTCTCGGG...................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................GAGGAGAACCGTGGCAAGGAAGAGCGt........ | 27 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ....................................................................................................................................................................................................................CAGGAGGAGAACCGTGGCAAGGAAG............. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................ACAGGGTGTGTCTGTGTCCAa.................................................... | 21 | a | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................................................................................................................................................................................AACAGGAGGAGAACCGTGGCAAGt................ | 24 | t | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| AAGCTGTACTCCGGCCCTCTGGATTTACTGGGATGGGGTTCAACTTTACCACACAGGAGGGTTGGGGACAGCATGACACAGCCCTGGAAATGTGACTGTTGTGGGGGTAGCACAGGAGGAGGCTCATGCCAATCCAGGTAGTCTGGAACACAGTCCCTCTCGGGTCAGCTCTGGCTTACAGGGTGTGTCTGTGTCCACAGGAAGGAGAGGAACAGGAGGAGAACCGTGGCAAGGAAGAGCGCCAGGAGCC ..............................................................................................................................((((......))))...(((.((((((.(((....)))...((((((.....))))))....)))))))))..................................................... .........................................................................................................................122...........................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................ACAGTCCCTCTCGGGTCAGCTCTGGCTTACA...................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |