| Gene: AK035515 | ID: uc007mwp.1_intron_0_0_chr12_3406712_r.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(17) TESTES |
| CACATATGCGTGGGTGGGTGTGCCCATGCTGTAGCACAGATATGGAGATCAGAGGATAACTTGTAGGCATCAGTTGTCTCTCTTACTATGTGTGGGCCCTGGGGATCCAATCAGGCTGCCAGCCTTGGCAGCAGGCACTTTGCCCACTGTGCTCTGTTACCAGCCCTAGCCTATTATCCTTTTCTTTCTTCCCGTGCCAGGAATGGAGCAGTGTCTTGAACGTGCTACACAAGCCCCCTAACAGCCAAGC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................CACTGTGCTCTGTTACCAGCCCTAGCCTATTATCCTTTTCTTTCTTCCCGTG...................................................... | 52 | 1 | 22.00 | 22.00 | 22.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................TGCTGTAGCACAGATATGGAGATCAGA..................................................................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................TGCTGTAGCACAGATATGGAGATCAGAGG................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................TGCTGTAGCACAGATATGGAGATCAGAt.................................................................................................................................................................................................... | 28 | t | 1.00 | 3.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................TGGAGATCAGAGGATAACTTGTAGG....................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................TGCTGTAGCACAGATATGGAGATCAGAGt................................................................................................................................................................................................... | 29 | t | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................TGAACGTGCTACACAAGCCCCCTAACAGCg.... | 30 | g | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................GCAGTGTCTTGAACGTGCTACACAAG................. | 26 | 2 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................TGAACGTGCTACACAAGCCCCCTAACAGCC.... | 30 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | 0.50 | - | - |
| ...............................TAGCACAGATATGGAGATCAGAGGAT................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................TCCCGTGCCAGGAATGGAGCAGTGTCT.................................. | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................TATTATCCTTTTCTTTCTTCCCGTGC..................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................TGCTGTAGCACAGATATGGAGATCAG...................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................TCTTGAACGTGCTACACAAGCCCCCTA.......... | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................TTGAACGTGCTACACAAGCCCCCTAACA....... | 28 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TGGAGCAGTGTCTTGAACGTGCTACAC.................... | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - |
| ........................................................................................................................................................................................................................TGAACGTGCTACACAAGCCCCCTAACAGCCAAG. | 33 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - |
| ........................................TATGGAGATCAGAGGATAAC.............................................................................................................................................................................................. | 20 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - |
| .........................................ATGGAGATCAGAGGATAACTT............................................................................................................................................................................................ | 21 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 |
| CACATATGCGTGGGTGGGTGTGCCCATGCTGTAGCACAGATATGGAGATCAGAGGATAACTTGTAGGCATCAGTTGTCTCTCTTACTATGTGTGGGCCCTGGGGATCCAATCAGGCTGCCAGCCTTGGCAGCAGGCACTTTGCCCACTGTGCTCTGTTACCAGCCCTAGCCTATTATCCTTTTCTTTCTTCCCGTGCCAGGAATGGAGCAGTGTCTTGAACGTGCTACACAAGCCCCCTAACAGCCAAGC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................TGGAGATCAGAGGATAACTTGTAGGCA..................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................AACGTGCTACACAAtcg.................. | 17 | tcg | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGTCTTGAACGTGCTACACAAGCCCCCT........... | 28 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - |