| Gene: 2310003H01Rik | ID: uc007msm.1_intron_4_0_chr11_120234558_r.3p | SPECIES: mm9 |
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(5) PIWI.ip |
(1) PIWI.mut |
(16) TESTES |
| GTGGCTCATAGGACTACCTGAGTCCCTGGTTCACGAGTTCCTGACAGTCCCTATTCCTCCCTGCCTCTTGCGTAACTTGCCTAGCTTCCTACTTGTACAAGGGCTGTGAGCATTTGAGACACTTAGGTGGCACTGGAAAAGAATCCTTTGGCGGAAGCCGCACAGGTGCCTCAGCTCCAGCAGGCGCCTCTCTCTTGCAGGTTTCCACCTGTGCAGCGCCACCCTGCGGTGGCTCCTTGCCGAGAACGCT ...........................................................................................(((....)))..(((((..((((((((...)))))))).....(((......)))...(((....))).)))))..................................................................................... ..........................................................................................91.........................................................................166.................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................TGGAAAAGAATCCTTTGGCGGAAGCCGCA........................................................................................ | 29 | 1 | 11.00 | 11.00 | 4.00 | - | 2.00 | - | 1.00 | 2.00 | - | - | - | - | - | 1.00 | 1.00 | - | - | - |
| .....................................................................................................................................TGGAAAAGAATCCTTTGGCGGAAGCCGCAC....................................................................................... | 30 | 1 | 7.00 | 7.00 | 2.00 | - | 3.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TACAAGGGCTGTGAGCATTTGAGACAC................................................................................................................................ | 27 | 1 | 6.00 | 6.00 | - | 4.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - |
| .....................................................................................................................................TGGAAAAGAATCCTTTGGCGGAAGCCGC......................................................................................... | 28 | 1 | 6.00 | 6.00 | 3.00 | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TACAAGGGCTGTGAGCATTTGAGACACTT.............................................................................................................................. | 29 | 1 | 4.00 | 4.00 | - | 2.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| ........TAGGACTACCTGAGTCCCTGGTTCACGA...................................................................................................................................................................................................................... | 28 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................TGCCTAGCTTCCTACTTGTACAAGGGC.................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................CCTACTTGTACAAGGGCTGTGAGCATT........................................................................................................................................ | 27 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................TGTGAGCATTTGAGACACTTAGGTGGCA...................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................GGTGGCACTGGAAAAGAATCCTTTGGC.................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................TGTGAGCATTTGAGACACTTAGGTGGC....................................................................................................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................TGGAAAAGAATCCTTTGGCGGAAGCCGt......................................................................................... | 28 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................TGTGAGCATTTGAGACACTTAGGTGGCAa..................................................................................................................... | 29 | a | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .....................................................................................................................................TGGAAAAGAATCCTTTGGCGGAAGC............................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............................................................................................TACAAGGGCTGTGAGCATTTGAGACAt................................................................................................................................ | 27 | t | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TGGCACTGGAAAAGAATCCTTTGGCGGA............................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................TCCTTTGGCGGAAGCCGCACAGGTGCC................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........TAGGACTACCTGAGTCCCTGGTTCACG....................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................TACTTGTACAAGGGCTGTGAGCATTTGAGAC.................................................................................................................................. | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................................TACAAGGGCTGTGAGCATT........................................................................................................................................ | 19 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........TAGGACTACCTGAGTCCCTGGTTCACGAGT.................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................AAGGGCTGTGAGCATTTGAGACACTTAGt........................................................................................................................... | 29 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............................................................................................TTGTACAAGGGCTGTGAGCATTTGAGA................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................TCCTACTTGTACAAGGGCTGTGAGCATT........................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................TGACAGTCCCTATTCCTCCCTGCCTCTT..................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................TTCCTACTTGTACAAGGGCTGTGAGCATT........................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................TTCCTCCCTGCCTCTTGCGTAACTTGCC......................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................AAGGGCTGTGAGCATTTGAGACACTTA............................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........AGGACTACCTGAGTCCCTGGTTCACGA...................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GTGGCTCATAGGACTACCTGAGTCCCTGGTTCACGAGTTCCTGACAGTCCCTATTCCTCCCTGCCTCTTGCGTAACTTGCCTAGCTTCCTACTTGTACAAGGGCTGTGAGCATTTGAGACACTTAGGTGGCACTGGAAAAGAATCCTTTGGCGGAAGCCGCACAGGTGCCTCAGCTCCAGCAGGCGCCTCTCTCTTGCAGGTTTCCACCTGTGCAGCGCCACCCTGCGGTGGCTCCTTGCCGAGAACGCT ...........................................................................................(((....)))..(((((..((((((((...)))))))).....(((......)))...(((....))).)))))..................................................................................... ..........................................................................................91.........................................................................166.................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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| ........................................CTGACAGTCCCTATTCCTCCCT............................................................................................................................................................................................ | 22 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - |
| .............................................................................................................................................................CACAGGTGCCTCAGCTCaaa......................................................................... | 20 | aaa | 2.00 | 0.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................CACAGGTGCCTCAGCTCaa......................................................................... | 19 | aa | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - |
| ................CCTGAGTCCCTGGTTCACGAGTTCCTG............................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - |
| ................CCTGAGTCCCTGGTTCACGAGTTCCTGA.............................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................CAGGCGCCTCTCTCTTGCAGGTT............................................... | 23 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................GCACAGGTGCCTCAGCTCccct......................................................................... | 22 | ccct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .............................................................................................................................................................CACAGGTGCCTCAGCTaaa.......................................................................... | 19 | aaa | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................GAAGCCGCACAGGTGCCTC.............................................................................. | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - |