(5)
OTHER.mut
(1)
OVARY
(5)
PIWI.ip
(2)
PIWI.mut
(29)
TESTES

Sense strand
TTGCCTTTATGTTTATGTTCACCGCCTTTCAGACTTGTGGAAATGTGGCGGTGAGTTGGAATCTGTACTCCTTCCTTTGAATGCCCGTCTGAATGCATTCCAGCTGTGACAATAAACGTTTATGTCCGCTACCACGCCAAGATTGCACCTCCTGTTTTTCAGCCTACCCTTTCTCGTTTTCTTAATTTTGTGTATCAGATATTTCGCGTTTACGTGGTGTTAAACACTTTCGTTTAATACTCAGATGCGGCTTGCAATTTGAGTATGGACCATAGTTACTTTAATTTTTGTGAATGTTAAACTCTGTATTTAGTGCTTGGGTGGCTTGTGGGTACAGTTGATTATCTGTTTCCCCATCTCGAGTATATCTTCTGCGGCAATTGAGTCGGTTTTTTTCTCCTCTCATGGTGGGCTTGGGTGAGAGGTGTGGATCATAACATTTTTTTTGAGTATTTAGACTTTCCTGCGGGGAGGGAGATGGCAAGACATTTTTGTTGATTAGTTTTATCTTCCACACAGCAAACTGTCATCAGGAGCTTAAATAGCACAGATTTTCATGGCAGTGGATA
........................................................................................................................................................................................................................................................................................................................................................................................................................................(((((((..((((........(((..(((((...((((((....)))))).))))).)))((((....))))........))))..)))))))....................................................
...................................................................................................................................................................................................................................................................................................................................................................................................................................420................................................................................................519................................................
Size Perfect hit Total Norm Perfect Norm SRR363963(GSM822765)
AdultGlobal 5'-RACEread_length: 105. (testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesWT4()
Testes Data. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR363960(GSM822762)
Adult Library#1Small RNA Miwi IPDuplexed run:. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR037903(GSM510439)
testes_rep4. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)
......................................................................................................................................................................................................................................................................................CTTTAATTTTTGTGAATGTTAAACTCTGTATTTAGTGCTTGGGTGGCTTGTG............................................................................................................................................................................................................................................... 52 1 98.00 98.00 98.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................TTTCAGACTTGTGGAAATGTGGCGc...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 25 c 6.00 0.00 - 3.00 - 2.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
...........................TTCAGACTTGTGGAAATGTGGCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 24 1 4.00 4.00 - 1.00 - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 -
...........................TTCAGACTTGTGGAAATGTGGCGGg..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 25 g 3.00 4.00 - - - - 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - 1.00 - -
...............................GACTTGTGGAAATGTGGCGGTGAGTTGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 29 1 3.00 3.00 - - 3.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................CCTTTCAGACTTGTGGAAATGTGGCGc...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 27 c 3.00 0.00 - 2.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.............................CAGACTTGTGGAAATGTGGCGGTGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 26 1 3.00 3.00 - - 3.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................TGGAATCTGTACTCCTTCCTTTGAATGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 28 1 2.00 2.00 - - - - - - 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
.......................GCCTTTCAGACTTGTGGAAATGTGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 27 1 2.00 2.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - 1.00 - - - - -
..............................AGACTTGTGGAAATGTGGCGcaa.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 23 caa 2.00 0.00 - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - -
...........................TTCAGACTTGTGGAAATGTGGCGc...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 24 c 2.00 1.00 - 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................TTCAGACTTGTGGAAATGTGGCGGTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 27 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATAGCACAGATTTTCATGGCAGT..... 26 1 2.00 2.00 - - - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - -
............................TCAGACTTGTGGAAATGTGGCGGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 25 1 2.00 2.00 - - - 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
...........................TTCAGACTTGTGGAAATGTGGCGcaaa................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 27 caaa 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
............TTATGTTCACCGCCTTTCAGACTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 24 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
............................TCAGACTTGTGGAAATGTGGCGca..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 24 ca 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.............................CAGACTTGTGGAAATGTGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 21 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.............................................................TCTGTACTCCTTCCTTTGAATGCCCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATAGCACAGATTTTCATGGCAGgg.... 27 gg 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................TAATACTCAGATGCGGCTTGCAATTT..................................................................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.........................................................................................TGAATGCATTCCAGCTGTGACAATAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGGCAAGACATaact............................................................................ 18 aact 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
...........................TTCAGACTTGTGGAAATGTGGCGGgt.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 gt 1.00 4.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTGAGAGGTGTGGATCATAccc.................................................................................................................................. 25 ccc 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
..........................TTTCAGACTTGTGGAAATGTGGCGGg..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 g 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................TTAATTTTGTGTATCAGATATTTCGCGTT....................................................................................................................................................................................................................................................................................................................................................................... 29 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
............................TCAGACTTGTGGAAATGTGGCGcaaa................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 caaa 1.00 0.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
....................................................................TCCTTCCTTTGAATGCCCGTCTGAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAATAGCACAGATTTTCc............ 20 c 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
...........................TTCAGACTTGTGGAAATGTGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 23 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTGAGTATTTAGgc.............................................................................................................. 20 gc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
...........................TTCAGACTTGTGGAAATGTGGCGca..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 25 ca 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
................................ACTTGTGGAAATGTGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 18 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATCAGGAGCTTAAATAGCACAGA.................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAATAGCACAGATTTTCATGGCAGT..... 27 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...........................TTCAGACTTGTGGAAATGTGacgg...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 24 acgg 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................GCCTTTCAGACTTGTGGAAATGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 24 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................................................................................TTGTGAATGTTAAACTCTGTATTTAGT............................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.....TTTATGTTTATGTTCACCGCCTTTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
.....TTTATGTTTATGTTCACCGCCTTTCAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................TAAACTCTGTATTTAGTGCTTGGGTG...................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.....................CCGCCTTTCAGACTTGTGGAAATGTGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 29 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -

Antisense strand
TTGCCTTTATGTTTATGTTCACCGCCTTTCAGACTTGTGGAAATGTGGCGGTGAGTTGGAATCTGTACTCCTTCCTTTGAATGCCCGTCTGAATGCATTCCAGCTGTGACAATAAACGTTTATGTCCGCTACCACGCCAAGATTGCACCTCCTGTTTTTCAGCCTACCCTTTCTCGTTTTCTTAATTTTGTGTATCAGATATTTCGCGTTTACGTGGTGTTAAACACTTTCGTTTAATACTCAGATGCGGCTTGCAATTTGAGTATGGACCATAGTTACTTTAATTTTTGTGAATGTTAAACTCTGTATTTAGTGCTTGGGTGGCTTGTGGGTACAGTTGATTATCTGTTTCCCCATCTCGAGTATATCTTCTGCGGCAATTGAGTCGGTTTTTTTCTCCTCTCATGGTGGGCTTGGGTGAGAGGTGTGGATCATAACATTTTTTTTGAGTATTTAGACTTTCCTGCGGGGAGGGAGATGGCAAGACATTTTTGTTGATTAGTTTTATCTTCCACACAGCAAACTGTCATCAGGAGCTTAAATAGCACAGATTTTCATGGCAGTGGATA
........................................................................................................................................................................................................................................................................................................................................................................................................................................(((((((..((((........(((..(((((...((((((....)))))).))))).)))((((....))))........))))..)))))))....................................................
...................................................................................................................................................................................................................................................................................................................................................................................................................................420................................................................................................519................................................
Size Perfect hit Total Norm Perfect Norm SRR363963(GSM822765)
AdultGlobal 5'-RACEread_length: 105. (testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesWT4()
Testes Data. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR363960(GSM822762)
Adult Library#1Small RNA Miwi IPDuplexed run:. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR037903(GSM510439)
testes_rep4. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAGCACAGATTTTCATGGCAGT..... 25 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................................................................................................................CAATTGAGTCGagga..................................................................................................................................................................................... 15 agga 1.00 0.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
.......................................................................................................................................................................TCTCGTTTTCTTAAggcc................................................................................................................................................................................................................................................................................................................................................................................................ 18 ggcc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -