| Gene: Sfrs2 | ID: uc007mmn.1_intron_1_0_chr11_116713646_r | SPECIES: mm9 |
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(7) OTHER.mut |
(1) PIWI.ip |
(1) PIWI.mut |
(20) TESTES |
| CCGCCACCCCGTCGGTACGGCGGCGGCGGCTACGGGCGGCGGAGCCGCAGGTGAGCGGGGCCCGGGGCGGAGCGGGAGGCGGACGGGCACAAAGGTACGCGGAGCACGTGGAGCCAGCCCCTCCCTCGCGGCCGGGGTGGCAGCAGGGCCGGGCCACTCCGTGCGAGACCCCGCCTCGCGGCAAGGGAAATGGCGCCTGGCAGCCAGATAATGGCGGCGGGGCGGGCGGGGCGGGACCGGCGGCCTGCAAGCTCACCCTGTCGCTTCGTTCACGTCCCACTCGCAGCCCTCGGCGACGCCGGCGCAGCCGATCTCGAAGCCGGAGTCGGTCCAGGT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................................................................................................................................................TTCGTTCACGTCCCACTCGCAG.................................................. | 22 | 1 | 6.00 | 6.00 | 1.00 | - | - | 4.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................TGTCGCTTCGTTCACGTCCCACT....................................................... | 23 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................GCGAGACCCCGCCTCtta............................................................................................................................................................ | 18 | tta | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| .......................CGGCGGCTACGGGCGGCGGAt.................................................................................................................................................................................................................................................................................................... | 21 | t | 2.00 | 0.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................TTCGTTCACGTCCCACTCGCA................................................... | 21 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................CTCGCAGCCCTCGGCGACGCCG................................... | 22 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................GCGGACGGGCACAAAGGTACGCGG.......................................................................................................................................................................................................................................... | 24 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................AAGGTACGCGGAGCACGTGGAGCCAGCCCCTCCC................................................................................................................................................................................................................... | 34 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................CGAAGCCGGAGTCGGTCCAGG. | 21 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................CGGAGCGGGAGGCac.............................................................................................................................................................................................................................................................. | 15 | ac | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................CGGGGCGGGACCGGCGGCCTGtaa...................................................................................... | 24 | taa | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................CTTCGTTCACGTCCCACTCGCAGt................................................. | 24 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................GGGCACAAAGGTACGCGGAGCACG.................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................TTCGTTCACGTCCCACTCGCAGa................................................. | 23 | a | 1.00 | 6.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................ACGCGGAGCACGTGGAGCCAGCCCCTC..................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................CGAAGCCGGAGTCGG....... | 15 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................TCGTTCACGTCCCACTCGCAG.................................................. | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................CGCCTGGCAGCCAttgc.............................................................................................................................. | 17 | ttgc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................................................................GGCAGCAGGGCCGGGCCACTCCG............................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................................................................................................................................................GCGAGACCCCGCCTCtt............................................................................................................................................................. | 17 | tt | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................CCGGCGCAGCCGATCTCGAAGCCG.............. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..................................................................................................................................................................GCGAGACCCCGCCTCta............................................................................................................................................................. | 17 | ta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................TGCAAGCTCACCCTGTCGCTcc..................................................................... | 22 | cc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................AGGTACGCGGAGCACGTGGA................................................................................................................................................................................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...........................................................................................AAGGTACGCGGAGCACGTGGA................................................................................................................................................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................GCGAGACCCCGCCTCtaa............................................................................................................................................................ | 18 | taa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................................CGGGCACAAAGGTACGCGGAGCACGTGGA................................................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................CGCTTCGTTCACGTCCCACTCGaa................................................... | 24 | aa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ............................................................................................AGGTACGCGGAGCACGTGGAG............................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................CAAGCTCACCCTGTCGCTTCGT................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........................................................................................................................................................................................................................GCGGGGCGGGCGGGGCGGG..................................................................................................... | 19 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CCGCCACCCCGTCGGTACGGCGGCGGCGGCTACGGGCGGCGGAGCCGCAGGTGAGCGGGGCCCGGGGCGGAGCGGGAGGCGGACGGGCACAAAGGTACGCGGAGCACGTGGAGCCAGCCCCTCCCTCGCGGCCGGGGTGGCAGCAGGGCCGGGCCACTCCGTGCGAGACCCCGCCTCGCGGCAAGGGAAATGGCGCCTGGCAGCCAGATAATGGCGGCGGGGCGGGCGGGGCGGGACCGGCGGCCTGCAAGCTCACCCTGTCGCTTCGTTCACGTCCCACTCGCAGCCCTCGGCGACGCCGGCGCAGCCGATCTCGAAGCCGGAGTCGGTCCAGGT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................CGGGAGGCGGACGGGggc......................................................................................................................................................................................................................................................... | 18 | ggc | 8.00 | 0.00 | - | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................CGGGAGGCGGACGGGg......................................................................................................................................................................................................................................................... | 16 | g | 6.00 | 0.00 | 4.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................GGACGGGCACAAAGGTACGCGGAGCA...................................................................................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................GCCTGCAAGCTCACCCTG............................................................................ | 18 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................CGGGAGGCGGACggcg............................................................................................................................................................................................................................................................ | 16 | ggcg | 2.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................ACCCTGTCGCTTCGTTCACGTCCCA......................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - |
| ....................................................................CGGGAGGCGGACGGGggcg......................................................................................................................................................................................................................................................... | 19 | ggcg | 2.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................GGCCGGGCCACTCCGTG............................................................................................................................................................................. | 17 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................CGGGAGGCGGACggc............................................................................................................................................................................................................................................................ | 15 | ggc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................CGGGAGGCGGACGGGgg......................................................................................................................................................................................................................................................... | 17 | gg | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................GCCGGCGCAGCCGATCTCGAAG................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................CGGGAGGCGGACGggc........................................................................................................................................................................................................................................................... | 16 | ggc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................CCTGCAAGCTCACCCTGT........................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |