| Gene: Jmjd6 | ID: uc007mmi.1_intron_1_0_chr11_116700443_r.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(6) PIWI.ip |
(1) PIWI.mut |
(17) TESTES |
| TGGCACAAGACGGTAAGAGGGAGACCAAAGTTATCAAGGAAGTGGTATAGGTGAGAAACCGTTTATTCCCTCTGCTTTGTTCCAGCTTTTTCCCCAAAGAGGAAAAGGGAAGCGGTCCCTGCTGCCATGTTGTGTGTGGGGACAGCCGGGCCTTACCGACCTGTGGGTAGAAAGGGCCCAGGTCAGAGCTAGTCGGCAGGGGGTCTGCTAGCCTCCAGGTGGCATCGTGCTTGGGTACGTGCGGCTGGCT .....................................................................................................................(((((((....(((.((..((....))((((((((((....(((....)))....))))))).))))).)))....))))))).................................................. .....................................................................................................................118...............................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) |
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| ..........................................................................................................................TGCCATGTTGTGTGTGGGGACAGCCGG..................................................................................................... | 27 | 1 | 7.00 | 7.00 | 2.00 | - | 2.00 | 1.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................AGAAAGGGCCCAGGTCAGAGCTAGTCGG...................................................... | 28 | 1 | 4.00 | 4.00 | - | - | - | 1.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................TATCAAGGAAGTGGTATAGGTGAGAA................................................................................................................................................................................................. | 26 | 1 | 4.00 | 4.00 | 2.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................TCAAGGAAGTGGTATAGGTGAGAAACCGT............................................................................................................................................................................................ | 29 | 1 | 3.00 | 3.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................AAAGTTATCAAGGAAGTGGTATAGGatc.................................................................................................................................................................................................... | 28 | atc | 3.00 | 0.00 | 1.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....CAAGACGGTAAGAGGGAGACCAAAGT........................................................................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................................................TGTGTGTGGGGACAGCCGGGC................................................................................................... | 21 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ........................CCAAAGTTATCAAGGAAGTGGTATAGaac..................................................................................................................................................................................................... | 29 | aac | 2.00 | 0.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TACCGACCTGTGGGTAGAAAGGG.......................................................................... | 23 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................AAGTTATCAAGGAAGTGGTATAGaaca.................................................................................................................................................................................................... | 27 | aaca | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TGCTAGCCTCCAGGTGGCATCGTGCTT.................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................ATCAAGGAAGTGGTATAGGat..................................................................................................................................................................................................... | 21 | at | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................TGGGTAGAAAGGGCCCAGGTCAGAGC............................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............TAAGAGGGAGACCAAAGTTATCAAGGAAGa............................................................................................................................................................................................................... | 30 | a | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................AAGGGCCCAGGTCAGAGCTAGTCGG...................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .......AGACGGTAAGAGGGAGACCAAAtt........................................................................................................................................................................................................................... | 24 | tt | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TGTTGTGTGTGGGGACAGCCGGGa................................................................................................... | 24 | a | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TACCGACCTGTGGGTAGAAAGGGCCC....................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................TTCCCCAAAGAGGAAAAGGGAAGCGGT...................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............TAAGAGGGAGACCAAAGTTATCAAGGAA................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ................................................................................................................................GTTGTGTGTGGGGACAGCCGGGC................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TGGCATCGTGCTTGGGTACGTGCGGC..... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................AGAAAGGGCCCAGGTCAGAGCTAGTCGGg..................................................... | 29 | g | 1.00 | 4.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................TGGGGACAGCCGGGCCTTACCGACC......................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................AGGAAGTGGTATAGGatct................................................................................................................................................................................................... | 19 | atct | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................ACCAAAGTTATCAAGGAAGTGGTA........................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....ACAAGACGGTAAGAGGGAGACCAA.............................................................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...CACAAGACGGTAAGAGGGAGACCAAAGT........................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ......................................................................................................................................TGTGGGGACAGCCGGGCCT................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .................................TCAAGGAAGTGGTATAGGTGAGAAAC............................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................TAGCCTCCAGGTGGCATCGTGCTTG................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........................................................................................................................................................................AGAAAGGGCCCAGGTCAGAGCTAGTCGGt..................................................... | 29 | t | 1.00 | 4.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................TGCCATGTTGTGTGTGGGGACAGCCGGG.................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TGGCACAAGACGGTAAGAGGGAGACCAAAGTTATCAAGGAAGTGGTATAGGTGAGAAACCGTTTATTCCCTCTGCTTTGTTCCAGCTTTTTCCCCAAAGAGGAAAAGGGAAGCGGTCCCTGCTGCCATGTTGTGTGTGGGGACAGCCGGGCCTTACCGACCTGTGGGTAGAAAGGGCCCAGGTCAGAGCTAGTCGGCAGGGGGTCTGCTAGCCTCCAGGTGGCATCGTGCTTGGGTACGTGCGGCTGGCT .....................................................................................................................(((((((....(((.((..((....))((((((((((....(((....)))....))))))).))))).)))....))))))).................................................. .....................................................................................................................118...............................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) |
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