| Gene: Sphk1 | ID: uc007mlh.1_intron_1_0_chr11_116395488_f.3p | SPECIES: mm9 |
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(1) OTHER.mut |
(5) PIWI.ip |
(2) PIWI.mut |
(18) TESTES |
| CTAGGCTGTGTATTTGGCGCCCTTGAAGGCCAGAAGAGGGCGTAGAGATCCTCAGGAACTGGACCTGGGAGTTCGGGACCACTGTGAGCCACCTTTCTGGTGCTGGAACTGAACCTGGGTCTTGTAGAAGAGCAGCAAGTGCTCTTACCTACCAAGCTCTCTCTCCAGCCCCATGTGGTGGTGTTGTGTTTTGTTTGTAGTAGAATGCCCTCGAGGACTGCTCCCACGGCCATGCAGAGTGCTGGTGCTG ..................................................(((....((.(((((..((..(((((..((......((.((((.....))))))))..)))))))..))))).))....)))...................................................................................................................... ..................................................51.................................................................................134.................................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) |
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| .......................................................................................................TGGAACTGAACCTGGGTCTTGTAGAAG........................................................................................................................ | 27 | 1 | 9.00 | 9.00 | 3.00 | - | 1.00 | 1.00 | - | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TGCCCTCGAGGACTGCTCCCACGGCC................... | 26 | 1 | 7.00 | 7.00 | - | - | 2.00 | 1.00 | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TTGTAGTAGAATGCCCTCGAGGACTGC............................. | 27 | 1 | 7.00 | 7.00 | 1.00 | 3.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TGCCCTCGAGGACTGCTCCCACGGCCA.................. | 27 | 1 | 7.00 | 7.00 | - | - | 3.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................TGGGAGTTCGGGACCACTGTGAGC................................................................................................................................................................. | 24 | 1 | 5.00 | 5.00 | 3.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................TAGTAGAATGCCCTCGAGGACTGCTCCC......................... | 28 | 1 | 5.00 | 5.00 | - | - | 3.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................TAGAGATCCTCAGGAACTGGACCTG....................................................................................................................................................................................... | 25 | 1 | 3.00 | 3.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TGGGTCTTGTAGAAGAGCAGCAAGTGC............................................................................................................ | 27 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................TAGTAGAATGCCCTCGAGGACTGCTC........................... | 26 | 1 | 3.00 | 3.00 | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................TGAACCTGGGTCTTGTAGAAGAGCAGC.................................................................................................................. | 27 | 1 | 3.00 | 3.00 | - | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TCGAGGACTGCTCCCACGGCCATGCAGAGTGC........ | 32 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - |
| ..................................................................................................................CTGGGTCTTGTAGAAGAGCAGCAAGT.............................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................TTGAAGGCCAGAAGAGGGCGTAGAGAT......................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................................................................................................................................................................................TAGAATGCCCTCGAGGACTGCTCCCAC....................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - |
| ............................................................................................................................................................................................................ATGCCCTCGAGGACTGCTCCCACGGCCA.................. | 28 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................TGAAGGCCAGAAGAGGGCGTAGAGAT......................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TCGAGGACTGCTCCCACGGCCATGCAG............. | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................AGGACTGCTCCCACGGCCATGCAGAGT.......... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TTGTAGTAGAATGCCCTCGAGGACTG.............................. | 26 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................TGTAGTAGAATGCCCTCGAGGACTGCTC........................... | 28 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TCGAGGACTGCTCCCACGGCCATGCAGAGT.......... | 30 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................TAGTAGAATGCCCTCGAGGACTGC............................. | 24 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................TGTTGTGTTTTGTTTGTAGTAGAATGCC......................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TCGAGGACTGCTCCCACGGCCATGC............... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............................................................................................................................................................................TGGTGGTGTTGTGTTTTGTTTGTAG.................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..................................................................................................................................................................................................................TCGAGGACTGCTCCCACGGCCATGCAGA............ | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................CTCAGGAACTGGACCTGGGAGTTCGGG............................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TGCCCTCGAGGACTGCTCCCACGGCt................... | 26 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TGGTGCTGGAACTGAACCTGGGTCTTGT............................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TGCCCTCGAGGACTGCTCCCACGG..................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................TTGAAGGCCAGAAGAGGGCGTAGAGATC........................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................ATGCCCTCGAGGACTGCTCCCACGGCC................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................CCTGGGTCTTGTAattg........................................................................................................................ | 17 | attg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .....................................................................................................................................................................................TGTTGTGTTTTGTTTGTAGTAGAATG........................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TTCTGGTGCTGGAACTGAACCTGGGTC................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................ACCTGGGTCTTGTAGAAGAGCAGCAAG............................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TGCTGGAACTGAACCTGGGTCTTGTAGAA......................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................TGGGAGTTCGGGACCACTGTGAGCCACC............................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..........................................TAGAGATCCTCAGGAACTGGACCTtt...................................................................................................................................................................................... | 26 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................GTTTGTAGTAGAATGCCCTCGAGGACT............................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................AGGAACTGGACCTGGGAGTTCGGG............................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................TCCTCAGGAACTGGACCTGG...................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TGGAACTGAACCTGGGTCTTGTAGAA......................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................CGGGACCACTGTGAGCCACCTTTCTGGTGC................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TGGAACTGAACCTGGGTCTTGTAGAAGt....................................................................................................................... | 28 | t | 1.00 | 9.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................CGAGGACTGCTCCCACGGCCATGCAGAa........... | 28 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TGGAACTGAACCTGGGTCTTGTAGAAGAG...................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................CTGGGTCTTGTAGAAGAGCAGCAtt............................................................................................................... | 25 | tt | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TGGTGCTGGAACTGAACCTGGGTCTT............................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................GTAGAGATCCTCAGGAACTGGACCTGG...................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................TAGAGATCCTCAGGAACTGGACCTGGaa.................................................................................................................................................................................... | 28 | aa | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................TAGAATGCCCTCGAGGACTGCTCCCACG...................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................................................................................................................................................................................TGTTGTGTTTTGTTTGTAGTAGAATGC.......................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................TGTAGTAGAATGCCCTCGAGGACTGCT............................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TTGTAGTAGAATGCCCTCGAGGACTGCT............................ | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................TTGTTTGTAGTAGAATGCCCTCGAGGAC................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................................TGGGTCTTGTAGAAGAGCAGCAAGTGCTCT......................................................................................................... | 30 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GTAGAATGCCCTCGAGGACTGCTCCC......................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TGCCCTCGAGGACTGCTCCCACGGaca.................. | 27 | aca | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................CTGGGTCTTGTAGAAGAGCAGCAAG............................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................CTGGTGCTGGAACTGAACCTGGGTC................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................GCGTAGAGATCggga.................................................................................................................................................................................................... | 15 | ggga | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................AATGCCCTCGAGGACTGCTCCCACGGCCAT................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................................................CTGGACCTGGGAGTTC................................................................................................................................................................................ | 16 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TGGGTCTTGTAGAAGAGCAGCAAG............................................................................................................... | 24 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................CTGAACCTGGGTCTTGTAGAAGAG...................................................................................................................... | 24 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| ..........................................................................................................AACTGAACCTGGGTCTTGTAGAAGAGC..................................................................................................................... | 27 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TGGGTCTTGTAGAAGAGCAGC.................................................................................................................. | 21 | 3 | 0.33 | 0.33 | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CTAGGCTGTGTATTTGGCGCCCTTGAAGGCCAGAAGAGGGCGTAGAGATCCTCAGGAACTGGACCTGGGAGTTCGGGACCACTGTGAGCCACCTTTCTGGTGCTGGAACTGAACCTGGGTCTTGTAGAAGAGCAGCAAGTGCTCTTACCTACCAAGCTCTCTCTCCAGCCCCATGTGGTGGTGTTGTGTTTTGTTTGTAGTAGAATGCCCTCGAGGACTGCTCCCACGGCCATGCAGAGTGCTGGTGCTG ..................................................(((....((.(((((..((..(((((..((......((.((((.....))))))))..)))))))..))))).))....)))...................................................................................................................... ..................................................51.................................................................................134.................................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) |
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