| Gene: Sphk1 | ID: uc007mlg.1_intron_4_0_chr11_116396682_f | SPECIES: mm9 |
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(1) OTHER.mut |
(2) PIWI.ip |
(2) PIWI.mut |
(14) TESTES |
| CCTGGAGGCTCCGGCAATGCGCTGGCAGCTTCTGTGAACCACTATGCTGGGTGAGAGCTGAGGGTCAGAGTGGGCATCATGTCCCCTACCGCCATTTTCTGAGTTCCTGTGGGAAGCTCCACTTTCTGCTGGAGTCTTGTCCTCAGTTTACTGGCCCTAGGGAGCCTCCATCTGCTGTCACTGACTCCAGCGACTCCCTAGGGACCACGGTTGCACTGCTAGCCCCCATTCCTCAAAAGGAGAACAAAGAGAACGCAAGAGGGCTCCTGTCCCATCTGATCTTTAACCTTGCAGGTACGAGCAGGTGACTAATGAAGACCTGCTCATCAACTGCACACTGCTGT ...................................................................................((((...((..((((((..((((..(((((..((((((........))))))........((((..((((.((((((((((..((...(((..(((...)))..))).))))))))))))....))))...))))......)))))((((....))))))))..)))))).))...))))................................................................................. .................................................................................82...................................................................................................................................................................................263............................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT1() Testes Data. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................................................................................................................TCTGATCTTTAACCTTGCAGGTACGAGC.......................................... | 28 | 1 | 7.00 | 7.00 | 3.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ................................TGTGAACCACTATGCTGGGTGAGAGC.............................................................................................................................................................................................................................................................................................. | 26 | 1 | 7.00 | 7.00 | 4.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................TGATCTTTAACCTTGCAGGTACGAGCAG........................................ | 28 | 1 | 6.00 | 6.00 | 4.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................................................TACCGCCATTTTCTGAGTTCCTGTGG........................................................................................................................................................................................................................................ | 26 | 1 | 5.00 | 5.00 | 2.00 | - | - | - | - | - | - | 2.00 | 1.00 | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................TGATCTTTAACCTTGCAGGTACGAGC.......................................... | 26 | 1 | 4.00 | 4.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................TCAAAAGGAGAACAAAGAGAACGCAAG..................................................................................... | 27 | 1 | 3.00 | 3.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - |
| ....................................................................................................................................................................................................................................................................................TGATCTTTAACCTTGCAGGTACGAGCA......................................... | 27 | 1 | 3.00 | 3.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................TGGGTGAGAGCTGAGGGTCAGAGTGG............................................................................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............CAATGCGCTGGCAGCTTCTGTGAACC................................................................................................................................................................................................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..............................TCTGTGAACCACTATGCTGGGTGAGAGC.............................................................................................................................................................................................................................................................................................. | 28 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................TGAAGACCTGCTCATCAACTGCACACTGC... | 29 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................TCCTCAAAAGGAGAACAAAGAGAACGC........................................................................................ | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGAGCTGAGGGTCAGAGTGG............................................................................................................................................................................................................................................................................... | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - |
| ................................TGTGAACCACTATGCTGGGTGAGAG............................................................................................................................................................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................AAAGGAGAACAAAGAGAACGCAAGAGG.................................................................................. | 27 | 1 | 2.00 | 2.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................TAGGGACCACGGTTGCACTGCTAG.......................................................................................................................... | 24 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................TAGGGACCACGGTTGCACTGCTAGCC........................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .................................................................................................................................TGGAGTCTTGTCCTCAGTTTACTGGCC............................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................AGGAGAACAAAGAGAACGCAAGAGGGCTCC............................................................................. | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TTCCTCAAAAGGAGAACAAAGAGAACG......................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .................................................................................................................................TGGAGTCTTGTCCTCAGTTTACTGGC............................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................TATGCTGGGTGAGAGCTGAGGGT....................................................................................................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................CTACCGCCATTTTCTGAGTTCCTGTG......................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGAGCTGAGGGTCAGAGTGGGCA............................................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................TGACTAATGAAGACCTGCTCATCAACTGC.......... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................TACCGCCATTTTCTGAGTTCCTGTG......................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................TGAAGACCTGCTCATCAACTGCACAC...... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................CAGCTTCTGTGAACCAC.............................................................................................................................................................................................................................................................................................................. | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................TAATGAAGACCTGCTCATCAACTGCACA....... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................AAAAGGAGAACAAAGAGAACGCAAGAGGGC................................................................................ | 30 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................TGCTGGGTGAGAGCTGAGGGTCAGAGT................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGAGCTGAGGGTCAGAGTGGG.............................................................................................................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................TCTGATCTTTAACCTTGCAGGTACGAGCAG........................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................................................................................................................................................................................................CCTCAAAAGGAGAACAAAGAGAACGC........................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................CCGCCATTTTCTGAGTTCCTGTGGG....................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................TGACTCCAGCGACTCCCTAGGGAC........................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................TAGGGACCACGGTTGCACTGCTAGCCC....................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................TGTCCCATCTGATCTTTAACCTTGCAG.................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................TATGCTGGGTGAGAGCTGAGGGTCt..................................................................................................................................................................................................................................................................................... | 25 | t | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................................TATGCTGGGTGAGAGCTGAGGG........................................................................................................................................................................................................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................TAGGGACCACGGTTGCACTGCTAGa......................................................................................................................... | 25 | a | 1.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................TGCTGGGTGAGAGCTGAGGGTCAGAG.................................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................TCAAAAGGAGAACAAAGAGAACGCAAGA.................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................TGCTGGGTGAGAGCTGAGGGTCAGA................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................ACCACTATGCTGGGTGAGAGCTGA........................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................TAATGAAGACCTGCTCATCAACTGCA......... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...........................................................................................................................................................................................................................................AAAGGAGAACAAAGAGAACGCAAGAGGG................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................TCTGATCTTTAACCTTGCAGGTACGAG........................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................TACCGCCATTTTCTGAGTTCCTGTGGGA...................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..TGGAGGCTCCGGCAATGCGCTGGCAGC........................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGAGCTGAGGGTCAGAGTGGGC............................................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................TAATGAAGACCTGCTCATCAACTGCACAC...... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................TGACTAATGAAGACCTGCTCATCAACTG........... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................AACAAAGAGAACGCAAGAGGGCTCCT............................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................GCCATTTTCTGAGTTCCTGTGGGAAGC................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CCTGGAGGCTCCGGCAATGCGCTGGCAGCTTCTGTGAACCACTATGCTGGGTGAGAGCTGAGGGTCAGAGTGGGCATCATGTCCCCTACCGCCATTTTCTGAGTTCCTGTGGGAAGCTCCACTTTCTGCTGGAGTCTTGTCCTCAGTTTACTGGCCCTAGGGAGCCTCCATCTGCTGTCACTGACTCCAGCGACTCCCTAGGGACCACGGTTGCACTGCTAGCCCCCATTCCTCAAAAGGAGAACAAAGAGAACGCAAGAGGGCTCCTGTCCCATCTGATCTTTAACCTTGCAGGTACGAGCAGGTGACTAATGAAGACCTGCTCATCAACTGCACACTGCTGT ...................................................................................((((...((..((((((..((((..(((((..((((((........))))))........((((..((((.((((((((((..((...(((..(((...)))..))).))))))))))))....))))...))))......)))))((((....))))))))..)))))).))...))))................................................................................. .................................................................................82...................................................................................................................................................................................263............................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT1() Testes Data. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................TGCTGGAGTCTTGatga............................................................................................................................................................................................................. | 17 | atga | 3.00 | 0.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................GTCCCCTACCGCCATTTTCTGAGTTCCTGTG......................................................................................................................................................................................................................................... | 31 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - |
| ...................................................................................................................................GAGTCTTGTCCTCAGTTTACTGGCCCTA......................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |