| Gene: Sphk1 | ID: uc007mlg.1_intron_1_0_chr11_116395488_f.3p | SPECIES: mm9 |
|
|
|
(1) OTHER.mut |
(5) PIWI.ip |
(2) PIWI.mut |
(18) TESTES |
| GGCTGTGTATTTGGCGCCCTTGAAGGCCAGAAGAGGGCGTAGAGATCCTCAGGAACTGGACCTGGGAGTTCGGGACCACTGTGAGCCACCTTTCTGGTGCTGGAACTGAACCTGGGTCTTGTAGAAGAGCAGCAAGTGCTCTTACCTACCAAGCTCTCTCTCCAGCCCCATGTGGTGGTGTTGTGTTTTGTTTGTAGTAGAATGCCCTCGAGGACTGCTCCCACGGCCATGCAGAGTGCTGGTGCTGCTG ......................................................((.(((((..((..(((((..((......((.((((.....))))))))..)))))))..))))).))................................................................................................................................ ..................................................51..............................................................................131..................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................TGGAACTGAACCTGGGTCTTGTAGAAG........................................................................................................................... | 27 | 1 | 9.00 | 9.00 | 3.00 | - | 1.00 | 1.00 | - | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TGCCCTCGAGGACTGCTCCCACGGCC...................... | 26 | 1 | 7.00 | 7.00 | - | - | 2.00 | 1.00 | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TTGTAGTAGAATGCCCTCGAGGACTGC................................ | 27 | 1 | 7.00 | 7.00 | 1.00 | 3.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TGCCCTCGAGGACTGCTCCCACGGCCA..................... | 27 | 1 | 7.00 | 7.00 | - | - | 3.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................TGGGAGTTCGGGACCACTGTGAGC.................................................................................................................................................................... | 24 | 1 | 5.00 | 5.00 | 3.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TAGTAGAATGCCCTCGAGGACTGCTCCC............................ | 28 | 1 | 5.00 | 5.00 | - | - | 3.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................TAGAGATCCTCAGGAACTGGACCTG.......................................................................................................................................................................................... | 25 | 1 | 3.00 | 3.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................TGGGTCTTGTAGAAGAGCAGCAAGTGC............................................................................................................... | 27 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TAGTAGAATGCCCTCGAGGACTGCTC.............................. | 26 | 1 | 3.00 | 3.00 | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................TGAACCTGGGTCTTGTAGAAGAGCAGC..................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................TCGAGGACTGCTCCCACGGCCATGCAGAGTGC........... | 32 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - |
| ...............................................................................................................CTGGGTCTTGTAGAAGAGCAGCAAGT................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................TTGAAGGCCAGAAGAGGGCGTAGAGAT............................................................................................................................................................................................................ | 27 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................................................................................................................................TAGAATGCCCTCGAGGACTGCTCCCAC.......................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - |
| .........................................................................................................................................................................................................ATGCCCTCGAGGACTGCTCCCACGGCCA..................... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................TGAAGGCCAGAAGAGGGCGTAGAGAT............................................................................................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................TCGAGGACTGCTCCCACGGCCATGCAG................ | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................AGGACTGCTCCCACGGCCATGCAGAGT............. | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TTGTAGTAGAATGCCCTCGAGGACTG................................. | 26 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................TGTAGTAGAATGCCCTCGAGGACTGCTC.............................. | 28 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................TCGAGGACTGCTCCCACGGCCATGCAGAGT............. | 30 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TAGTAGAATGCCCTCGAGGACTGC................................ | 24 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................TGTTGTGTTTTGTTTGTAGTAGAATGCC............................................ | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................TCGAGGACTGCTCCCACGGCCATGC.................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ............................................................................................................................................................................TGGTGGTGTTGTGTTTTGTTTGTAG..................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...............................................................................................................................................................................................................TCGAGGACTGCTCCCACGGCCATGCAGA............... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................CTCAGGAACTGGACCTGGGAGTTCGGG................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TGCCCTCGAGGACTGCTCCCACGGCt...................... | 26 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TGGTGCTGGAACTGAACCTGGGTCTTGT................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TGCCCTCGAGGACTGCTCCCACGG........................ | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................TTGAAGGCCAGAAGAGGGCGTAGAGATC........................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................ATGCCCTCGAGGACTGCTCCCACGGCC...................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................CCTGGGTCTTGTAattg........................................................................................................................... | 17 | attg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................................................................................................................................................TGTTGTGTTTTGTTTGTAGTAGAATG.............................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TTCTGGTGCTGGAACTGAACCTGGGTC.................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................ACCTGGGTCTTGTAGAAGAGCAGCAAG.................................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TGCTGGAACTGAACCTGGGTCTTGTAGAA............................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................TGGGAGTTCGGGACCACTGTGAGCCACC................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .......................................TAGAGATCCTCAGGAACTGGACCTtt......................................................................................................................................................................................... | 26 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................GTTTGTAGTAGAATGCCCTCGAGGACT.................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................AGGAACTGGACCTGGGAGTTCGGG................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................TCCTCAGGAACTGGACCTGG......................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TGGAACTGAACCTGGGTCTTGTAGAA............................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................CGGGACCACTGTGAGCCACCTTTCTGGTGC...................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TGGAACTGAACCTGGGTCTTGTAGAAGt.......................................................................................................................... | 28 | t | 1.00 | 9.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................CGAGGACTGCTCCCACGGCCATGCAGAa.............. | 28 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TGGAACTGAACCTGGGTCTTGTAGAAGAG......................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................CTGGGTCTTGTAGAAGAGCAGCAtt.................................................................................................................. | 25 | tt | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TGGTGCTGGAACTGAACCTGGGTCTT.................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................GTAGAGATCCTCAGGAACTGGACCTGG......................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................TAGAGATCCTCAGGAACTGGACCTGGaa....................................................................................................................................................................................... | 28 | aa | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................TAGAATGCCCTCGAGGACTGCTCCCACG......................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................................................................................................................................................TGTTGTGTTTTGTTTGTAGTAGAATGC............................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................TGTAGTAGAATGCCCTCGAGGACTGCT............................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TTGTAGTAGAATGCCCTCGAGGACTGCT............................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................TTGTTTGTAGTAGAATGCCCTCGAGGAC................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................TGGGTCTTGTAGAAGAGCAGCAAGTGCTCT............................................................................................................ | 30 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................GTAGAATGCCCTCGAGGACTGCTCCC............................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TGCCCTCGAGGACTGCTCCCACGGaca..................... | 27 | aca | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................CTGGGTCTTGTAGAAGAGCAGCAAG.................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................................................CTGGTGCTGGAACTGAACCTGGGTC.................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................GCGTAGAGATCggga....................................................................................................................................................................................................... | 15 | ggga | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................AATGCCCTCGAGGACTGCTCCCACGGCCAT.................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................................................CTGGACCTGGGAGTTC................................................................................................................................................................................... | 16 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................TGGGTCTTGTAGAAGAGCAGCAAG.................................................................................................................. | 24 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................CTGAACCTGGGTCTTGTAGAAGAG......................................................................................................................... | 24 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| .......................................................................................................AACTGAACCTGGGTCTTGTAGAAGAGC........................................................................................................................ | 27 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................TGGGTCTTGTAGAAGAGCAGC..................................................................................................................... | 21 | 3 | 0.33 | 0.33 | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GGCTGTGTATTTGGCGCCCTTGAAGGCCAGAAGAGGGCGTAGAGATCCTCAGGAACTGGACCTGGGAGTTCGGGACCACTGTGAGCCACCTTTCTGGTGCTGGAACTGAACCTGGGTCTTGTAGAAGAGCAGCAAGTGCTCTTACCTACCAAGCTCTCTCTCCAGCCCCATGTGGTGGTGTTGTGTTTTGTTTGTAGTAGAATGCCCTCGAGGACTGCTCCCACGGCCATGCAGAGTGCTGGTGCTGCTG ......................................................((.(((((..((..(((((..((......((.((((.....))))))))..)))))))..))))).))................................................................................................................................ ..................................................51..............................................................................131..................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) |
|---|