| Gene: Wbp2 | ID: uc007mjv.1_intron_1_0_chr11_115941099_r | SPECIES: mm9 |
|
|
(6) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(20) TESTES |
| GCCCATGGAGCCTCCGGTCAGCGGCCCCAGTGCCCCCGCTACTCCTGCAGGTGAGGCCTCTCAGCTGCCAGCAGTCCTTCATGACCAGTCCTCTCCTCCCCAAGGGCTTGCAGAGAACTCCCAACAATGGCTGGAGACTACTGACGGTCAAATGATGAAGGGCCTCTGGGTTACAGACCACCCAAAAGGCACCAGCACAGTGGTAGCCTGGTGGTGAAGAGCTATATCCAAGGGCTGGGTGTGGTTCAGTGTGCACTTGCTTGAGTGGGCTGGGCCTGGGCTCTATCCCAGGTGCCACAGAACACAAATCCAAAGGTACGGTGAGATGAGGACTCTGTGGCTTCTTGGCTTATGGTGACCTTTTTGGAGTCAGAAGATCACCTCTGTAACTCAGTGTTCTCGCCTACAAATGGGCCTAGGAGCTTGGATGAGGGCGGAGGAGGGGCTCACCGCTTGCTGCTATCTCCCCATGTGTTTGCTTTAACAGCCGAGGCCAAGGCTGCAGAAGCCGCTGCCAGTGCCTATTACAACCCAGGC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................................................................................................................................................................................................................AGAAGATCACCTCTGTAACTCAGTGT............................................................................................................................................ | 26 | 1 | 8.00 | 8.00 | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................ACTACTGACGGTCAAATGATGAA.......................................................................................................................................................................................................................................................................................................................................................................................... | 23 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................CCCCAGTGCCCCCGggcg............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | ggcg | 2.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................TGGTAGCCTGGTGGTGAAGAGCTAT........................................................................................................................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................AAAGGTACGGTGAGATGAGGACTCTG........................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....TGGAGCCTCCGGTCAGCGGCCCCAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCCTAGGAGCTTGGATGAGGGCG..................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................AATGGGCCTAGGAGCTTGG.............................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCAGTGCCTATTACAACCCAGGCaat | 28 | aat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................CAAATGGGCCTAGGAGCTTGGATGAGG........................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCGGAGGAGGGGCaaa........................................................................................ | 18 | aaa | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................TCCAAGGGCTGGGTcggt..................................................................................................................................................................................................................................................................................................... | 18 | cggt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................TTGAGTGGGCTGGGCCTGGGCT............................................................................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATGAGGGCGGAGctga.............................................................................................. | 19 | ctga | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................GTACGGTGAGATGAGGACTCT......................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGGCCTCTCAGCTGCCAGCAGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TGGCTGGAGACTACTGACGGTC.................................................................................................................................................................................................................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ................................................................................................TCCCCAAGGGCTTGCAGAGAACTCCCAAC............................................................................................................................................................................................................................................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GCCCATGGAGCCTCCGGTCAGCGGCCCCAGTGCCCCCGCTACTCCTGCAGGTGAGGCCTCTCAGCTGCCAGCAGTCCTTCATGACCAGTCCTCTCCTCCCCAAGGGCTTGCAGAGAACTCCCAACAATGGCTGGAGACTACTGACGGTCAAATGATGAAGGGCCTCTGGGTTACAGACCACCCAAAAGGCACCAGCACAGTGGTAGCCTGGTGGTGAAGAGCTATATCCAAGGGCTGGGTGTGGTTCAGTGTGCACTTGCTTGAGTGGGCTGGGCCTGGGCTCTATCCCAGGTGCCACAGAACACAAATCCAAAGGTACGGTGAGATGAGGACTCTGTGGCTTCTTGGCTTATGGTGACCTTTTTGGAGTCAGAAGATCACCTCTGTAACTCAGTGTTCTCGCCTACAAATGGGCCTAGGAGCTTGGATGAGGGCGGAGGAGGGGCTCACCGCTTGCTGCTATCTCCCCATGTGTTTGCTTTAACAGCCGAGGCCAAGGCTGCAGAAGCCGCTGCCAGTGCCTATTACAACCCAGGC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................CCTCTCAGCTGCCAGCAGTCCTTCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 25 | 1 | 10.00 | 10.00 | - | 1.00 | 5.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................AAGGGCTTGCAGAGAACTCCCAACAA.......................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................GGTGCCACAGAACACAAATCCAAAGGTA........................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ....................................................GAGGCCTCTCAGCTGCCAGCAGTCCTTCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................CAGGTGCCACAGAACACAAATCCAA................................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................TCTGTAACTCAGTGTTCTCGCCTACAA................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................ACCTCTGTAACTCAGTGTTCTCGCCTA................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TGAGGCCTCTCAGCTGCCAGCAGTCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................TCCCCAAGGGCTTGCAGAGAACTCCCA.............................................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |