(6)
OTHER.mut
(5)
PIWI.ip
(2)
PIWI.mut
(24)
TESTES

Sense strand
TGCTACAGTTATCTACATCTTCATGAGATGGGTGGATTTTCCCACGGTCATGAGTAAGGGTCGGTCTGTGGTCATATATAAAAGTCCCAAAGGTCCAGCCTCCCCTGCTGACCCACCTAGCGCAGACCCCTGGGCAGCCCAGCCCGCCTCCATGAAGCCTCTCCCAAGAGTAAGGCCATATTCTGTTTTGATTTTGGTAGATAATCTTGTGCCGTGGAAGTCAGAAGGGCAAAACGAAGCAGTCCTGACA
............................................................................(((.((((((.....((..((((.......))))..)).......(((((.....((((......))))...........(((((((....)))..)))).....)))))...)))))).)))...................................................
.......................................................................72..............................................................................................................................200................................................
Size Perfect hit Total Norm Perfect Norm SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
mjTestesWT3()
Testes Data. (testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
............................................................................................................................................................................................................TCTTGTGCCGTGGAAGTCAGAAGGG..................... 25 1 11.00 11.00 3.00 - 2.00 1.00 2.00 - 2.00 - 1.00 - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................TGTGCCGTGGAAGTCAGAAGGGCAAA................. 26 1 11.00 11.00 7.00 - - - 2.00 - - 1.00 - - - - - - - - - - 1.00 - - - - -
............................................................................................................................................................................................................TCTTGTGCCGTGGAAGTCAGAAGGGC.................... 26 1 10.00 10.00 2.00 1.00 1.00 3.00 1.00 - - 1.00 - - 1.00 - - - - - - - - - - - - -
..............................................................................................................................................................................................................TTGTGCCGTGGAAGTCAGAAGGGCAA.................. 26 1 4.00 4.00 1.00 - 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................TGATTTTGGTAGATAATCTTGTGCCGT................................... 27 1 4.00 4.00 - 3.00 - - - - - - 1.00 - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................TGTGCCGTGGAAGTCAGAAGGGCAAAA................ 27 1 4.00 4.00 2.00 - 1.00 - - - - 1.00 - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................TGGAAGTCAGAAGGGCAAAACGAAGC.......... 26 1 4.00 4.00 2.00 - 1.00 - - - 1.00 - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................GAAGGGCAAAACGAAGCAGTCCTGACA 27 1 3.00 3.00 1.00 - - 2.00 - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................TAATCTTGTGCCGTGGAAGTCAGAAG....................... 26 1 3.00 3.00 - 1.00 - - - 1.00 - - - - - 1.00 - - - - - - - - - - - -
.......................................................................................................................................................................................................GATAATCTTGTGCCGTGGAAGTCAGA......................... 26 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................TGTGCCGTGGAAGTCAGAAGGGCAA.................. 25 1 2.00 2.00 - - 1.00 - - - - 1.00 - - - - - - - - - - - - - - - -
..........................................................................................................................................................................TAAGGCCATATTCTGTTTTGATTTTG...................................................... 26 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - -
.......................TGAGATGGGTGGATTTTCCCACGGT.......................................................................................................................................................................................................... 25 1 2.00 2.00 - 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - -
......................................................................................................................................................................................................................TGGAAGTCAGAAGGGCAAAACGAAG........... 25 1 2.00 2.00 - - - 2.00 - - - - - - - - - - - - - - - - - - - -
............................................................................TATAAAAGTCCCAAAGGTCCAGCCTCCC.................................................................................................................................................. 28 1 2.00 2.00 - 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................TGGAAGTCAGAAGGGCAAAACGAAGCAGT....... 29 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................TTGTGCCGTGGAAGTCAGAAGGGCAt.................. 26 t 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................TGATTTTGGTAGATAATCTTGTGCCG.................................... 26 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................TCTTGTGCCGTGGAAGTCAGAAGGGt.................... 26 t 1.00 11.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..........................................................................TATATAAAAGTCCCAAAGGTCCAGCCT..................................................................................................................................................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.................................................................................AAGTCCCAAAGGTCCAGCCTCCCC................................................................................................................................................. 24 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.........................................................................................................TGCTGACCCACCTAGCGCAGACCCCTG...................................................................................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
............................................................................TATAAAAGTCCCAAAGGTCCAGCCTCC................................................................................................................................................... 27 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................TCTTGTGCCGTGGAAGTCAGAAGGGCA................... 27 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.................................................................................................................................................................TCCCAAGAGTAAGGCCATATTCTGTT............................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.......................TGAGATGGGTGGATTTTCCCACGGTC......................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -
.............TACATCTTCATGAGATGGGTGGATTTTCCCt.............................................................................................................................................................................................................. 31 t 1.00 0.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - -
..........................GATGGGTGGATTTTCCCACGGTCATG...................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - -
.........................................................................................................TGCTGACCCACCTAGCGCAGACC.......................................................................................................................... 23 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - -
...............................................................................................................................................................TCTCCCAAGAGTAAGGCCATATTCTGTTT.............................................................. 29 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
..........................................................................TATATAAAAGTCCCAAAGGTCCAGCCTC.................................................................................................................................................... 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..............................................................................TAAAAGTCCCAAAGGTCCAGCCTCCCC................................................................................................................................................. 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.............TACATCTTCATGAGATGGGTGGATTTT.................................................................................................................................................................................................................. 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................TTGTGCCGTGGAAGTCAGAAGGGCA................... 25 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - -
......................................TTCCCACGGTCATGAGTAAGGGTCGGT......................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -
....................................................................................................................................................................................................GTAGATAATCTTGTGCCGTGGAAG.............................. 24 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - -
................................TGGATTTTCCCACGGTCATGAGTAAG................................................................................................................................................................................................ 26 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.......................................TCCCACGGTCATGAGTAAGGGTCtgt......................................................................................................................................................................................... 26 tgt 1.00 0.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.......................................TCCCACGGTCATGAGTAAGGGTCGGT......................................................................................................................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..................................................TGAGTAAGGGTCGGTCTGTGGcca................................................................................................................................................................................ 24 cca 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...................TTCATGAGATGGGTGGATTTTCCCACGGT.......................................................................................................................................................................................................... 29 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................GAAGTCAGAAGGGCAAAACGAAGCAG........ 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................GTGCCGTGGAAGTCAGAA........................ 18 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - -
.......................................................................................................................................................................................TGTTTTGATTTTGGTAGATAATCTTGTG....................................... 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...................TTCATGAGATGGGTGGATTTTCCCACG............................................................................................................................................................................................................ 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - -
....................................................AGTAAGGGTCGGTCTGTGGTCATATA............................................................................................................................................................................ 26 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - -
...........................................................................................................................................................................................TTGATTTTGGTAGATAATCTTGTGC...................................... 25 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -
..................................................................................................................................................................................TATTCTGTTTTGATTTTGGTAGATAATCT........................................... 29 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - -
..................................................................................................................................................................................................TGGTAGATAATCTTGTGCCGTGGAAGTC............................ 28 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................TTGTGCCGTGGAAGTCAGAAGGG..................... 23 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - -
.......................TGAGATGGGTGGATTTTCCCACGGTCA........................................................................................................................................................................................................ 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00
..........................................................................................................................................................................................TTTGATTTTGGTAGATAATCTTGTGC...................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..........................................................................TATATAAAAGTCCCAAAGGTCCAGCCTCC................................................................................................................................................... 29 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................AAGGGCAAAACGAAGCAGTCCTGACA 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................TGGTAGATAATCTTGTGCCGTGGAAGT............................. 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................TAATCTTGTGCCGTGGAAGTCAGAAGG...................... 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.........................................................................ATATATAAAAGTCCCAAAGGTCCAGCCT..................................................................................................................................................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................ATCTTGTGCCGTGGAAGTCAGAAGGGC.................... 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
............................................................................TATAAAAGTCCCAAAGGTCCAGCCTCCCC................................................................................................................................................. 29 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -
............................................................TCGGTCTGTGGTCATATATAAAAGT..................................................................................................................................................................... 25 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................GTAGATAATCTTGTGCCGTGGAAGTC............................ 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................TTTGATTTTGGTAGATAATCTTGTtc...................................... 26 tc 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - -
..................................................TGAGTAAGGGTCGGTCTGTGGTCA................................................................................................................................................................................ 24 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................GTAGATAATCTTGTGCCGTGGAAGTCA........................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - -
............................................................TCGGTCTGTGGTCATATATAAA........................................................................................................................................................................ 22 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 -
................................................................................................................................................................................................................................AAGGGCAAAACGAAGCAGTCCTGACAaa 28 aa 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - -

Antisense strand
TGCTACAGTTATCTACATCTTCATGAGATGGGTGGATTTTCCCACGGTCATGAGTAAGGGTCGGTCTGTGGTCATATATAAAAGTCCCAAAGGTCCAGCCTCCCCTGCTGACCCACCTAGCGCAGACCCCTGGGCAGCCCAGCCCGCCTCCATGAAGCCTCTCCCAAGAGTAAGGCCATATTCTGTTTTGATTTTGGTAGATAATCTTGTGCCGTGGAAGTCAGAAGGGCAAAACGAAGCAGTCCTGACA
............................................................................(((.((((((.....((..((((.......))))..)).......(((((.....((((......))))...........(((((((....)))..)))).....)))))...)))))).)))...................................................
.......................................................................72..............................................................................................................................200................................................
Size Perfect hit Total Norm Perfect Norm SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
mjTestesWT3()
Testes Data. (testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
.......................................................GTCGGTCTGTGGTgaaa.................................................................................................................................................................................. 17 gaaa 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................ATCTTGTGCCGTggg................................... 15 ggg 1.00 0.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - -