| Gene: Ccdc103 | ID: uc007lst.1_intron_2_0_chr11_102744011_f | SPECIES: mm9 |
|
|
(6) OTHER.mut |
(6) PIWI.ip |
(20) TESTES |
| GCCAAGTTACGGGCAGTTGAGCAAAGGGTGCCTTCCTATGAGGAGTTCAGGTTGGCTTGCTATTTTTCTCAGGCCCTCCTCTCATGGTGGGCTACAGGAATTAAAAGCAAGCAGTCTAAATTGAGATCATTCTAGGCTTCTGTCATGCCCCCACCCTCTGCTACCTGATGATCTTACCAAAGCTCCTTAACCTGACTGAGCCTCAATTTTGTAAGAGAGAGGAATGGTTGCTATCGTTGCATGAGTTATGGCCTGAAAGATGCTGAGCACAGCAGCTAGCCCATTTGAAGTGCGTGAAGACTTTCAGCCCTCTATGCTGCTGCTGTTGTAGTAGTTGCCCTGTTTCCCGTCAACAAGTGTAGCCAAGTAGCTGCCCTCCACACAGGGAATCATTAAGCTCATTCCCCAATCTCTACCTTTGACACAGAGGTATTGTTCTTGCATCACACCTGAAACCTCTGGAACAAAAGGACAAGA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT2() Testes Data. (testes) | SRR042485(GSM539877) mouse testicular tissue [09-002]. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......TTACGGGCAGTTGAGCAAAGGGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 25 | 1 | 5.00 | 5.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................TGGCCTGAAAGATGCTGAGCACAGCAGC......................................................................................................................................................................................................... | 28 | 1 | 5.00 | 5.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAACCTCTGGAACAAAAGGACAAGA | 27 | 1 | 4.00 | 4.00 | - | - | 1.00 | - | - | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................CGTGAAGACTTTCAtaca....................................................................................................................................................................... | 18 | taca | 4.00 | 0.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .......TACGGGCAGTTGAGCAAAGGGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 24 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................TGGCCTGAAAGATGCTGAGCACAGCAG.......................................................................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ....................................................................................TGGTGGGCTACAGGAATTAAAAGCAAGC............................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................TGAGTTATGGCCTGAAAGATGCTGAGC................................................................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................TACCTGATGATCTTACCAAAGCTCCTT................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................TGTTGTAGTAGTTGCCCTGTTTCCCGTCA............................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTCTGGAACAAAAGGACAAGAtggt | 28 | tggt | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................TGAGTTATGGCCTGAAAGATGCTGA................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAACCTCTGGAACAAAAGGACAAGAtgt | 30 | tgt | 1.00 | 4.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................TGAGTTATGGCCTGAAAGATGCTGAG.................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................TGAAAGATGCTGAGCACAGCAGCTAGC..................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................CCATTTGAAGTGCGaatt................................................................................................................................................................................... | 18 | aatt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................AAGTGCGTGAAGACTcctt........................................................................................................................................................................... | 19 | cctt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .......................................................................................TGGGCTACAGGAATTAAAAGCAAGCAG........................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCATCACACCTGAAACCTCTGGAAC............ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................TGACTGAGCCTCAATTTTGTAAGAGAG.................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .........CGGGCAGTTGAGCAAAGGGTGCCTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .CCAAGTTACGGGCAGTTGAGCAAAGGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................TGGCCTGAAAGATGCTGAGCACAGCAGCT........................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| GCCAAGTTACGGGCAGTTGAGCAAAGGGTGCCTTCCTATGAGGAGTTCAGGTTGGCTTGCTATTTTTCTCAGGCCCTCCTCTCATGGTGGGCTACAGGAATTAAAAGCAAGCAGTCTAAATTGAGATCATTCTAGGCTTCTGTCATGCCCCCACCCTCTGCTACCTGATGATCTTACCAAAGCTCCTTAACCTGACTGAGCCTCAATTTTGTAAGAGAGAGGAATGGTTGCTATCGTTGCATGAGTTATGGCCTGAAAGATGCTGAGCACAGCAGCTAGCCCATTTGAAGTGCGTGAAGACTTTCAGCCCTCTATGCTGCTGCTGTTGTAGTAGTTGCCCTGTTTCCCGTCAACAAGTGTAGCCAAGTAGCTGCCCTCCACACAGGGAATCATTAAGCTCATTCCCCAATCTCTACCTTTGACACAGAGGTATTGTTCTTGCATCACACCTGAAACCTCTGGAACAAAAGGACAAGA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT2() Testes Data. (testes) | SRR042485(GSM539877) mouse testicular tissue [09-002]. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|