| Gene: Etv4 | ID: uc007lps.1_intron_5_0_chr11_101635192_r | SPECIES: mm9 |
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(1) OTHER.mut |
(3) PIWI.ip |
(2) PIWI.mut |
(15) TESTES |
| TCCAGCTCTTCCCAGTCCCACCCTGGCCACGGGTACCTTGGTGAGCACAGGTAAGGAGACAGATCTGAAGCACCGGGGGACCCGGGCCTCGCCAGGCAGTCTGGGCTCAGTTCCTTAGTTCTCTATAGAGACCTGGCTGGGAGAACCAGGAGATGGTGTCTCATTGTCCCTCCAGAGCCCTGTCAACAGGTGACAGGCTCAAGGGGGCTAATGGAAGATTCTCTTTTCTTCCTTCCTCATCCATGACCTCCAGCTCCGTCTTCCAGCAGCCCGTGGACATGTGCCACTCCTTCACATCTCCTC .......................................................(((.(((((........(((((...)))))((((....)))).)))))..))).((((((((((((((....))))....)))))).))))............................................................................................................................................................. ..................................................51.............................................................................................146........................................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTAAGGAGACAGATCTGAAGCACCGGG.................................................................................................................................................................................................................................. | 27 | 1 | 14.00 | 14.00 | 7.00 | 4.00 | - | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................GTAAGGAGACAGATCTGAAGCACCGGt.................................................................................................................................................................................................................................. | 27 | t | 4.00 | 3.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAAGGAGACAGATCTGAAGCACCGG................................................................................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | 1.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAAGGAGACAGATCTGAAGCACCGGa.................................................................................................................................................................................................................................. | 27 | a | 2.00 | 3.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................AGGAGACAGATCTGAAGCACCGGGGG................................................................................................................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAAGGAGACAGATCTGAAGCA....................................................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........CCCAGTCCCACCCTGGCCACGGGTA............................................................................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TAGTTCTCTATAGAGACCTGGCTGGGA................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................TTCCAGCAGCCCGTGGACATGTGCCA................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................TGGTGTCTCATTGTCCCTCCAGAGt............................................................................................................................. | 25 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................TCCAGCAGCCCGTGGACATGTGCCACT............... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................TAAGGAGACAGATCTGAAGCACCGGG.................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................GTAAGGAGACAGATCTGAAGCACCGGGG................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................AAGGAGACAGATCTGAAGCACCGGGG................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................ATTGTCCCTCCAGAGCCCTGT........................................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAAGGAGACAGATCTGAAGCAC...................................................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................CCACGGGTACCTTGG...................................................................................................................................................................................................................................................................... | 15 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................GCTCAGTTCCTTAGTaacc.................................................................................................................................................................................... | 19 | aacc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................GTAAGGAGACAGATCTGAAGCACCGGGt................................................................................................................................................................................................................................. | 28 | t | 1.00 | 14.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| TCCAGCTCTTCCCAGTCCCACCCTGGCCACGGGTACCTTGGTGAGCACAGGTAAGGAGACAGATCTGAAGCACCGGGGGACCCGGGCCTCGCCAGGCAGTCTGGGCTCAGTTCCTTAGTTCTCTATAGAGACCTGGCTGGGAGAACCAGGAGATGGTGTCTCATTGTCCCTCCAGAGCCCTGTCAACAGGTGACAGGCTCAAGGGGGCTAATGGAAGATTCTCTTTTCTTCCTTCCTCATCCATGACCTCCAGCTCCGTCTTCCAGCAGCCCGTGGACATGTGCCACTCCTTCACATCTCCTC .......................................................(((.(((((........(((((...)))))((((....)))).)))))..))).((((((((((((((....))))....)))))).))))............................................................................................................................................................. ..................................................51.............................................................................................146........................................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................................................................................GACCTCCAGCTCCGTCTTCCAGCAGCCCGta.............................. | 31 | ta | 3.00 | 0.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................GTCTGGGCTCAGTTCCTTAGTTCTCTA.................................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - |
| ........................................................................................................GCTCAGTTCCTTAGTTCTCTA.................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................CTTCACATCTCCTCcatt | 18 | catt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...........................................................................................................................................................................................................................TCTCTTTTCTTCCTTCCTCATCCATGAC........................................................ | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................AGTCTGGGCTCAGTTCCTTAGTTCTCTATA................................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................GTCTGGGCTCAGTTCCTTAGTTCTCTAa.................................................................................................................................................................................. | 28 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................TCCATGACCTCCAGCTCCGTCTTCCA...................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................TCCGTCTTCCAGCAGCCCGTGGACA........................ | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |