| Gene: Tmem106a | ID: uc007lpm.1_intron_0_0_chr11_101443640_f | SPECIES: mm9 |
|
|
|
(2) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(16) TESTES |
| TAAATGTGCAGCTCCCGCAGTTTCGATTTTGCTGAGGGCGTTGTCACCTGGTAAGGCGTCCCTGGGACCCCATCTCTTTACCCTTTTCAAAGCAAGAATTCAGAGACGTTTGGGCTTACTCAGCGCCCAACACGTTGTTGCCCAAATTTGACTAACGGCCAGTGAGGTGGGATTTAAAATCCTTCCTCGATGAAATCCTACCTTTTCCTTCCTTGCCTACCATAGCAGAATCCCCTAGTAGAGAGGACTTGACCCTCCCGGTAGACAAGAGTCCCTGCTCCCCACTTTCAACACATTGACTCTCTCTGGTCTCCGCTGAATTGAGCTGTTCAACTCCACCCTACCCTAGAGGCCCTTCTCCCCAAAGGAGCATTCCAGAAAACCCAATCTTGGAGCTGAGCAGAGCCTGGAATCCCA ...........................................................................................(((((...((((....((((((((.....(((((.......)))))..)))))))))))).....((.....((((((((((((...(((.......))).))))))))))))..))...)))))(((((...((((......)).))...((((.......))))..)))))......................................................................................................................................................... ..............................................................................79.........................................................................................................................................................................................266..................................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................TTTTCAAAGCAAGAATTCAGAGACGTT................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 13.00 | 13.00 | 4.00 | 4.00 | 4.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................TTCAAAGCAAGAATTCAGAGACGTTTG................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 3.00 | 3.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................TTTCAAAGCAAGAATTCAGAGACGTTT.................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 3.00 | 3.00 | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................TCAAAGCAAGAATTCAGAGACGTTTG................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................TTCAAAGCAAGAATTCAGAGACGTTT.................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................TCTTGGAGCTGAGCAGAGCCTGGAATC... | 27 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCTGAGCAGAGCCTGGAATCCC. | 26 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................TAGTAGAGAGGACTTGACCCTCCCGGT........................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................CTTTTCAAAGCAAGAATTCAGAGACGT.................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................TTCGATTTTGCTGAGGGCGTTGTCAC.................................................................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................GAAAACCCAATCTTGGAGCTGAGCAGA............. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCTGAGCAGAGCCTGGAga.... | 23 | ga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................................................................................................................TTTGACTAACGGCCAGTGAGGTGGGA..................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................TCAAAGCAAGAATTCAGAGACGTTT.................................................................................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ........................................................................................................................................................................................................................................................................................................TGACTCTCTCTGGTCTCCGCTGAATT............................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................ACCCTTTTCAAAGCAAGAATTCAGAGACGT.................................................................................................................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCTGAGCAGAGCCTGGAATCCCA | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................GAATTGAGCTGTTCAAC................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................TTTTCAAAGCAAGAATTCAGAGACGT.................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCTGAGCAGAGCCTGGAATCaaa | 27 | aaa | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................GAGGGCGTTGTCACCTGGTAAG.......................................................................................................................................................................................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ....................................................................................................................................................................................................................TTGCCTACCATAGCAGAATCCCCTAGTAGAa.............................................................................................................................................................................. | 31 | a | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................TGTTCAACTCCACCCTACCCTAGAGGCCC.............................................................. | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................GTTTCGATTTTGCTGAGGGCGTT....................................................................................................................................................................................................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..............................................................................TACCCTTTTCAAAGCAAGAATTCAGAGACGTT................................................................................................................................................................................................................................................................................................................... | 32 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................CGCTGAATTGAGCTGTTCAACTCCACC............................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................TCTTGGAGCTGAGCAGAGCCTGGAAT.... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................AACCCAATCTTGGAGCTGAGCAGAGCCT......... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................TTGGAGCTGAGCAGAGCCTGGAATCC.. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................TCTTGGAGCTGAGCAGAGCCTGGAATCC.. | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TAAATGTGCAGCTCCCGCAGTTTCGATTTTGCTGAGGGCGTTGTCACCTGGTAAGGCGTCCCTGGGACCCCATCTCTTTACCCTTTTCAAAGCAAGAATTCAGAGACGTTTGGGCTTACTCAGCGCCCAACACGTTGTTGCCCAAATTTGACTAACGGCCAGTGAGGTGGGATTTAAAATCCTTCCTCGATGAAATCCTACCTTTTCCTTCCTTGCCTACCATAGCAGAATCCCCTAGTAGAGAGGACTTGACCCTCCCGGTAGACAAGAGTCCCTGCTCCCCACTTTCAACACATTGACTCTCTCTGGTCTCCGCTGAATTGAGCTGTTCAACTCCACCCTACCCTAGAGGCCCTTCTCCCCAAAGGAGCATTCCAGAAAACCCAATCTTGGAGCTGAGCAGAGCCTGGAATCCCA ...........................................................................................(((((...((((....((((((((.....(((((.......)))))..)))))))))))).....((.....((((((((((((...(((.......))).))))))))))))..))...)))))(((((...((((......)).))...((((.......))))..)))))......................................................................................................................................................... ..............................................................................79.........................................................................................................................................................................................266..................................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................................................CCTTCCTCGATGAAAggga.............................................................................................................................................................................................................................. | 19 | ggga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |